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Computational Designed Nanocage O43_129_+4
Descriptor:	O43_129_+4 component A, O43_129_+4 component B
Authors:	Carr, K.D, Weidle, C, Borst, A.J.
Deposit date:	2023-11-27
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	ELECTRON MICROSCOPY (6.4 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

8V2D

Computational Designed Nanocage O43_129
Descriptor:	O43_129 component A, O43_129 component B
Authors:	Weidle, C, Kibler, R.D.
Deposit date:	2023-11-22
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	ELECTRON MICROSCOPY (6.77 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

3GBN

Crystal Structure of Fab CR6261 in Complex with the 1918 H1N1 influenza virus hemagglutinin
Descriptor:	1,2-ETHANEDIOL, 2-ETHOXYETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Ekiert, D.C, Elsliger, M.A, Wilson, I.A.
Deposit date:	2009-02-20
Release date:	2009-03-10
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Antibody recognition of a highly conserved influenza virus epitope. Science, 324, 2009

8GA7

Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR5
Authors:	Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:	2023-02-22
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.93 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

8G9J

Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR1
Authors:	Huddy, T, Bera, A.K, Baker, D.
Deposit date:	2023-02-21
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

8GA6

Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR6
Authors:	Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:	2023-02-22
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

8G9K

Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR2
Authors:	Bera, A.K, Huddy, T, Baker, D, Kang, A.
Deposit date:	2023-02-21
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.48 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

3SDY

Crystal Structure of Broadly Neutralizing Antibody CR8020 Bound to the Influenza A H3 Hemagglutinin
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody CR8020, Heavy Chain, ...
Authors:	Ekiert, D.C, Wilson, I.A.
Deposit date:	2011-06-09
Release date:	2011-07-20
Last modified:	2021-04-07
Method:	X-RAY DIFFRACTION (2.85 Å)
Cite:	A highly conserved neutralizing epitope on group 2 influenza A viruses. Science, 333, 2011

8EVM

De novo design of chlorophyll special pair containing protein assemblies
Descriptor:	Chlorophyll dimer protein designs, Special Pair 3 (SP3x)
Authors:	Bera, A.K, Ennist, N.M.
Deposit date:	2022-10-20
Release date:	2024-05-15
Last modified:	2024-06-12
Method:	X-RAY DIFFRACTION (3.05 Å)
Cite:	De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nat.Chem.Biol., 2024

4FQR

Crystal structure of broadly neutralizing antibody C05 bound to H3 influenza hemagglutinin
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Broadly neutralizing antibody C05, ...
Authors:	Ekiert, D.C, Wilson, I.A.
Deposit date:	2012-06-25
Release date:	2012-09-19
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (4.1 Å)
Cite:	Cross-neutralization of influenza A viruses mediated by a single antibody loop. Nature, 489, 2012

4FNL

Crystal structure of broadly neutralizing antibody C05
Descriptor:	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Antibody C05, Heavy Chain, ...
Authors:	Ekiert, D.C, Wilson, I.A.
Deposit date:	2012-06-19
Release date:	2012-09-19
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.297 Å)
Cite:	Cross-neutralization of influenza A viruses mediated by a single antibody loop. Nature, 489, 2012

4FNK

Crystal structure of the A/Hong Kong/1/1968 (H3N2) influenza virus hemagglutinin
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:	Ekiert, D.C, Wilson, I.A.
Deposit date:	2012-06-19
Release date:	2012-09-19
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (1.901 Å)
Cite:	Cross-neutralization of influenza A viruses mediated by a single antibody loop. Nature, 489, 2012

4FP8

Crystal structure of broadly neutralizing antibody C05 bound to H3 influenza hemagglutinin, HA1 subunit
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody C05, ...
Authors:	Ekiert, D.C, Wilson, I.A.
Deposit date:	2012-06-21
Release date:	2012-09-19
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.947 Å)
Cite:	Cross-neutralization of influenza A viruses mediated by a single antibody loop. Nature, 489, 2012

4NM8

Crystal structure of broadly neutralizing antibody CR8043 bound to H3 influenza hemagglutinin
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody CR8043, ...
Authors:	Lee, P.S, Wilson, I.A.
Deposit date:	2013-11-14
Release date:	2013-12-25
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (4.0041 Å)
Cite:	A common solution to group 2 influenza virus neutralization. Proc.Natl.Acad.Sci.USA, 111, 2014

4NM4

Crystal structure of broadly neutralizing antibody CR8043
Descriptor:	Antibody CR8043, Heavy Chain, Light Chain, ...
Authors:	Lee, P.S, Wilson, I.A.
Deposit date:	2013-11-14
Release date:	2013-12-25
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.65 Å)
Cite:	A common solution to group 2 influenza virus neutralization. Proc.Natl.Acad.Sci.USA, 111, 2014

6XNS

C3_crown-05
Descriptor:	C3_crown-05
Authors:	Bick, M.J, Hsia, Y, Sankaran, B, Baker, D.
Deposit date:	2020-07-04
Release date:	2020-12-23
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (3.19 Å)
Cite:	Design of multi-scale protein complexes by hierarchical building block fusion. Nat Commun, 12, 2021

6XI6

Hierarchical design of multi-scale protein complexes by combinatorial assembly of oligomeric helical bundle and repeat protein building blocks
Descriptor:	helical fusion design
Authors:	Bera, A.K, Hsia, Y, Kang, A.S, Shankaran, B, Baker, D.
Deposit date:	2020-06-19
Release date:	2021-06-02
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.69 Å)
Cite:	Design of multi-scale protein complexes by hierarchical building block fusion. Nat Commun, 12, 2021

6XH5

Hierarchical design of multi-scale protein complexes by combinatorial assembly of oligomeric helical bundle and repeat protein building blocks
Descriptor:	helical fusion design
Authors:	Bera, A.K, Hsia, Y, Kang, A.S, Baker, D.
Deposit date:	2020-06-18
Release date:	2021-06-02
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (3.32 Å)
Cite:	Design of multi-scale protein complexes by hierarchical building block fusion. Nat Commun, 12, 2021

6XT4

C3_HD-1069 (1BH-69) - fusion protein of helical bundle and repeat protein
Descriptor:	1BH_69
Authors:	Bick, M.J, Hsia, Y, Sankaran, B, Baker, D.
Deposit date:	2020-07-17
Release date:	2020-12-23
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Design of multi-scale protein complexes by hierarchical building block fusion. Nat Commun, 12, 2021

7UNJ

De novo designed chlorophyll dimer protein with Zn pheophorbide a methyl ester matching geometry of purple bacterial special pair, SP1-ZnPPaM
Descriptor:	1,2-ETHANEDIOL, SP1-ZnPPaM designed chlorophyll dimer protein, SULFATE ION, ...
Authors:	Kennedy, M.A, Stoddard, B.L, Ennist, N.M.
Deposit date:	2022-04-11
Release date:	2023-04-19
Last modified:	2024-06-12
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nat.Chem.Biol., 2024

7UNH

De novo designed chlorophyll dimer protein in apo state, SP2
Descriptor:	1,2-ETHANEDIOL, SP2 designed chlorophyll dimer protein
Authors:	Kennedy, M.A, Stoddard, B.L, Ennist, N.M.
Deposit date:	2022-04-11
Release date:	2023-04-19
Last modified:	2024-06-12
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nat.Chem.Biol., 2024

7UNI

De novo designed chlorophyll dimer protein with Zn pheophorbide a methyl ester, SP2-ZnPPaM
Descriptor:	1,2-ETHANEDIOL, PHOSPHATE ION, SP2-ZnPPaM designed chlorophyll dimer protein, ...
Authors:	Kennedy, M.A, Stoddard, B.L, Ennist, N.M.
Deposit date:	2022-04-11
Release date:	2023-04-19
Last modified:	2024-06-12
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	De novo design of proteins housing excitonically coupled chlorophyll special pairs. Nat.Chem.Biol., 2024

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