Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8ABW
DownloadVisualize
BU of 8abw by Molmil
Crystal structure of SpLdpA in complex with threo-DGPD
Descriptor: (1R,2R)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, (1S,2S)-1,2-bis(3-methoxy-4-oxidanyl-phenyl)propane-1,3-diol, SULFATE ION, ...
Authors:Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
Deposit date:2022-07-04
Release date:2023-02-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation.
Proc.Natl.Acad.Sci.USA, 120, 2023
5MDQ
DownloadVisualize
BU of 5mdq by Molmil
Crystal structure of outer membrane expressed Chitoporin VhChip from Vibrio harveyi
Descriptor: Chitoporin, SODIUM ION
Authors:Zahn, M, van den Berg, B.
Deposit date:2016-11-13
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for chitin acquisition by marine Vibrio species.
Nat Commun, 9, 2018
5MDR
DownloadVisualize
BU of 5mdr by Molmil
Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi in complex with chitohexaose
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitoporin, ...
Authors:Zahn, M, van den Berg, B.
Deposit date:2016-11-13
Release date:2017-12-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for chitin acquisition by marine Vibrio species.
Nat Commun, 9, 2018
5MDO
DownloadVisualize
BU of 5mdo by Molmil
Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi (crystal form I)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Chitoporin, SODIUM ION
Authors:Zahn, M, van den Berg, B.
Deposit date:2016-11-13
Release date:2017-12-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for chitin acquisition by marine Vibrio species.
Nat Commun, 9, 2018
6FSU
DownloadVisualize
BU of 6fsu by Molmil
Crystal structure of E.coli BamA beta-barrel with a C-terminal extension
Descriptor: Outer membrane protein assembly factor BamA
Authors:Zahn, M, Hartmann, J.-B, Hiller, S.
Deposit date:2018-02-20
Release date:2018-11-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Sequence-Specific Solution NMR Assignments of the beta-Barrel Insertase BamA to Monitor Its Conformational Ensemble at the Atomic Level.
J. Am. Chem. Soc., 140, 2018
8R2T
DownloadVisualize
BU of 8r2t by Molmil
Crystal structure of 4-hydroxybenzoate-1-hydroxylase from Gelatoporia subvermispora (GsMNX1)
Descriptor: CHLORIDE ION, FAD-binding domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Zahn, M, Kuatsjah, E, Salvachua, D.
Deposit date:2023-11-07
Release date:2024-11-13
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (1.824 Å)
Cite:Biochemical and structural characterization of enzymes in the 4-hydroxybenzoate catabolic pathway of lignin-degrading white-rot fungi.
Cell Rep, 43, 2024
8R2V
DownloadVisualize
BU of 8r2v by Molmil
Crystal structure of hydroxyquinol-1,2-dioxygenase from Gelatoporia subvermispora (GsHDX1)
Descriptor: FE (III) ION, Intradiol ring-cleavage dioxygenases domain-containing protein, PHOSPHATIDYLETHANOLAMINE, ...
Authors:Zahn, M, Kuatsjah, E, Salvachua, D.
Deposit date:2023-11-07
Release date:2024-11-13
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Biochemical and structural characterization of enzymes in the 4-hydroxybenzoate catabolic pathway of lignin-degrading white-rot fungi.
Cell Rep, 43, 2024
8R2W
DownloadVisualize
BU of 8r2w by Molmil
Crystal structure of hydroxyquinol-1,2-dioxygenase from Trametes versicolor (TvHDX1)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, Hydroxyquinol 1,2-dioxygenase, ...
Authors:Zahn, M, Kuatsjah, E, Salvachua, D.
Deposit date:2023-11-07
Release date:2024-11-13
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Biochemical and structural characterization of enzymes in the 4-hydroxybenzoate catabolic pathway of lignin-degrading white-rot fungi.
Cell Rep, 43, 2024
8R2U
DownloadVisualize
BU of 8r2u by Molmil
Crystal structure of hydroquinone-2-hydroxylase from Trametes versicolor (TvMNX3)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Phenol 2-monooxygenase
Authors:Zahn, M, Kuatsjah, E, Salvachua, D.
Deposit date:2023-11-07
Release date:2024-11-13
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Biochemical and structural characterization of enzymes in the 4-hydroxybenzoate catabolic pathway of lignin-degrading white-rot fungi.
Cell Rep, 43, 2024
8R2X
DownloadVisualize
BU of 8r2x by Molmil
Crystal structure of hydroxyquinol-1,2-dioxygenase from Rhodococcus jostii RHA1 (RjTsdC)
Descriptor: 6-chlorohydroxyquinol-1,2-dioxygenase, FE (III) ION, PHOSPHATIDYLETHANOLAMINE
Authors:Zahn, M, Kuatsjah, E, Salvachua, D.
Deposit date:2023-11-07
Release date:2024-11-13
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (1.573 Å)
Cite:Biochemical and structural characterization of enzymes in the 4-hydroxybenzoate catabolic pathway of lignin-degrading white-rot fungi.
Cell Rep, 43, 2024
4E81
DownloadVisualize
BU of 4e81 by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with a short apidaecin peptide
Descriptor: Chaperone protein DnaK, SULFATE ION, apidaecin peptide fragment
Authors:Zahn, M, Straeter, N.
Deposit date:2012-03-19
Release date:2012-05-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Api88 is a novel antibacterial designer Peptide to treat systemic infections with multidrug-resistant gram-negative pathogens.
Acs Chem.Biol., 7, 2012
9FF9
DownloadVisualize
BU of 9ff9 by Molmil
Crystal structure of N-terminal acetylated tropomyosin Cdc8
Descriptor: Tropomyosin
Authors:Zahn, M, Heiringhoff, R.S, Fedorov, R, Manstein, D.J.
Deposit date:2024-05-22
Release date:2024-11-06
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (2.195 Å)
Cite:Crystal structures of cables formed by the acetylated and unacetylated forms of the Schizosaccharomyces pombe tropomyosin ortholog Tpm Cdc8 .
J.Biol.Chem., 300, 2024
4DGJ
DownloadVisualize
BU of 4dgj by Molmil
Structure of a human enteropeptidase light chain variant
Descriptor: Enteropeptidase catalytic light chain
Authors:Zahn, M, Simeonov, P, Straeter, N.
Deposit date:2012-01-26
Release date:2012-04-18
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a supercharged variant of the human enteropeptidase light chain.
Proteins, 80, 2012
3QNJ
DownloadVisualize
BU of 3qnj by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with the antimicrobial peptide oncocin
Descriptor: Chaperone protein DnaK, SULFATE ION, antimicrobial peptide oncocin
Authors:Zahn, M, Straeter, N.
Deposit date:2011-02-08
Release date:2011-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Rational Design of Oncocin Derivatives with Superior Protease Stabilities and Antibacterial Activities Based on the High-Resolution Structure of the Oncocin-DnaK Complex.
Chembiochem, 12, 2011
1HH9
DownloadVisualize
BU of 1hh9 by Molmil
ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH A PEPTIDE
Descriptor: IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN), IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN), PEP-2
Authors:Hahn, M, Wessner, H, Schneider-Mergener, J, Hohne, W.
Deposit date:2000-12-21
Release date:2001-01-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Evolutionary Transition Pathways for Changing Peptide Ligand Specificity and Structure
Embo J., 19, 2000
1HH6
DownloadVisualize
BU of 1hh6 by Molmil
ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH A PEPTIDE
Descriptor: IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN), IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN), PEP-4
Authors:Hahn, M, Wessner, H, Schneider-Mergener, J, Hohne, W.
Deposit date:2000-12-21
Release date:2001-01-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Evolutionary Transition Pathways for Changing Peptide Ligand Specificity and Structure
Embo J., 19, 2000
1MD2
DownloadVisualize
BU of 1md2 by Molmil
CHOLERA TOXIN B-PENTAMER WITH DECAVALENT LIGAND BMSC-0013
Descriptor: 3-ETHYLAMINO-4-METHYLAMINO-CYCLOBUTANE-1,2-DIONE, CHOLERA TOXIN B SUBUNIT, CYANIDE ION, ...
Authors:Zhang, Z, Merritt, E.A, Ahn, M, Roach, C, Hol, W.G.J, Fan, E.
Deposit date:2002-08-06
Release date:2002-12-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Solution and crystallographic studies of branched multivalent ligands that inhibit the receptor-binding of cholera toxin.
J.Am.Chem.Soc., 124, 2002
1FD7
DownloadVisualize
BU of 1fd7 by Molmil
HEAT-LABILE ENTEROTOXIN B-PENTAMER WITH BOUND LIGAND BMSC001
Descriptor: HEAT-LABILE ENTEROTOXIN B CHAIN, N-BENZYL-3-(ALPHA-D-GALACTOS-1-YL)-BENZAMIDE
Authors:Fan, E, Merritt, E.A, Pickens, J, Ahn, M, Hol, W.G.J.
Deposit date:2000-07-19
Release date:2000-08-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploration of the GM1 receptor-binding site of heat-labile enterotoxin and cholera toxin by phenyl-ring-containing galactose derivatives.
Acta Crystallogr.,Sect.D, 57, 2001
7QWT
DownloadVisualize
BU of 7qwt by Molmil
Rieske non-heme iron monooxygenase for guaiacol O-demethylation
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Rieske (2Fe-2S) domain protein
Authors:Hinchen, D.J, Zahn, M, Bleem, A, Beckham, G.T, McGeehan, J.E.
Deposit date:2022-01-25
Release date:2022-06-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.712 Å)
Cite:Discovery, characterization, and metabolic engineering of Rieske non-heme iron monooxygenases for guaiacol O-demethylation
Chem Catal, 2022
2WOQ
DownloadVisualize
BU of 2woq by Molmil
Porphobilinogen Synthase (HemB) in Complex with 5-acetamido-4- oxohexanoic acid (Alaremycin 2)
Descriptor: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ALAREMYCIN 2, ...
Authors:Heinemann, I.U, Schulz, C, Schubert, W.-D, Heinz, D.W, Wang, Y.-G, Kobayashi, Y, Awa, Y, Wachi, M, Jahn, D, Jahn, M.
Deposit date:2009-07-27
Release date:2009-10-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of the heme biosynthetic Pseudomonas aeruginosa porphobilinogen synthase in complex with the antibiotic alaremycin.
Antimicrob. Agents Chemother., 54, 2010
7OJY
DownloadVisualize
BU of 7ojy by Molmil
Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 6
Descriptor: 2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]-~{N}-[(5-oxidanyl-1,3,4-oxadiazol-2-yl)methyl]ethanamide, Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase, CHLORIDE ION
Authors:Ryan, M.D, Parkes, A.L, Southey, M, Andersen, O.A, Zahn, M, Barker, J, DeJonge, B.L.M.
Deposit date:2021-05-17
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Novel UDP- N -Acetylglucosamine Acyltransferase (LpxA) Inhibitors with Activity against Pseudomonas aeruginosa .
J.Med.Chem., 64, 2021
7OKB
DownloadVisualize
BU of 7okb by Molmil
Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 45
Descriptor: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, CHLORIDE ION, SULFATE ION, ...
Authors:Ryan, M.D, Parkes, A.L, Southey, M, Andersen, O.A, Zahn, M, Barker, J, DeJonge, B.L.M.
Deposit date:2021-05-17
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.58 Å)
Cite:Discovery of Novel UDP- N -Acetylglucosamine Acyltransferase (LpxA) Inhibitors with Activity against Pseudomonas aeruginosa .
J.Med.Chem., 64, 2021
7OKC
DownloadVisualize
BU of 7okc by Molmil
Crystal structure of Escherichia coli LpxA in complex with compound 1
Descriptor: 2-[2-(2-chlorophenyl)sulfanylethanoyl-[[4-(1,2,4-triazol-1-yl)phenyl]methyl]amino]-N-methyl-ethanamide, Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, SODIUM ION
Authors:Ryan, M.D, Parkes, A.L, Southey, M, Andersen, O.A, Zahn, M, Barker, J, DeJonge, B.L.M.
Deposit date:2021-05-17
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Discovery of Novel UDP- N -Acetylglucosamine Acyltransferase (LpxA) Inhibitors with Activity against Pseudomonas aeruginosa .
J.Med.Chem., 64, 2021
7OK1
DownloadVisualize
BU of 7ok1 by Molmil
Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 3
Descriptor: Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase, CHLORIDE ION, ~{N}-[(5-azanyl-1,3,4-oxadiazol-2-yl)methyl]-2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]ethanamide
Authors:Ryan, M.D, Parkes, A.L, Southey, M, Andersen, O.A, Zahn, M, Barker, J, DeJonge, B.L.M.
Deposit date:2021-05-17
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Discovery of Novel UDP- N -Acetylglucosamine Acyltransferase (LpxA) Inhibitors with Activity against Pseudomonas aeruginosa .
J.Med.Chem., 64, 2021
7OJP
DownloadVisualize
BU of 7ojp by Molmil
Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 1
Descriptor: 2-[2-(2-chlorophenyl)sulfanylethanoyl-[[4-(1,2,4-triazol-1-yl)phenyl]methyl]amino]-N-methyl-ethanamide, Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase, MAGNESIUM ION
Authors:Ryan, M.D, Parkes, A.L, Southey, M, Andersen, O.A, Zahn, M, Barker, J, DeJonge, B.L.M.
Deposit date:2021-05-17
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Discovery of Novel UDP- N -Acetylglucosamine Acyltransferase (LpxA) Inhibitors with Activity against Pseudomonas aeruginosa .
J.Med.Chem., 64, 2021

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon