8FXR
| Structure of neck with portal vertex of capsid of Agrobacterium phage Milano | Descriptor: | Collar sheath protein, gp13, Linking protein 1, ... | Authors: | Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. | Deposit date: | 2023-01-25 | Release date: | 2023-12-06 | Method: | ELECTRON MICROSCOPY (4.5 Å) | Cite: | Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
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8FWG
| Structure of neck and portal vertex of Agrobacterium phage Milano, C5 symmetry | Descriptor: | Collar sheath protein, gp13, Linking protein 1, ... | Authors: | Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. | Deposit date: | 2023-01-22 | Release date: | 2023-12-06 | Method: | ELECTRON MICROSCOPY (3.45 Å) | Cite: | Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
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8FWM
| Structure of tail-neck junction of Agrobacterium phage Milano | Descriptor: | Collar sheath protein, gp13, Tail sheath protein, ... | Authors: | Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. | Deposit date: | 2023-01-23 | Release date: | 2023-12-06 | Method: | ELECTRON MICROSCOPY (3.49 Å) | Cite: | Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
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8FWC
| Collar sheath structure of Agrobacterium phage Milano | Descriptor: | Collar sheath protein, gp13 | Authors: | Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. | Deposit date: | 2023-01-20 | Release date: | 2023-12-06 | Method: | ELECTRON MICROSCOPY (2.96 Å) | Cite: | Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
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8FWE
| Neck structure of Agrobacterium phage Milano, C3 symmetry | Descriptor: | Collar sheath protein, gp13, Neck 1 protein, ... | Authors: | Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H. | Deposit date: | 2023-01-21 | Release date: | 2023-12-06 | Method: | ELECTRON MICROSCOPY (3.46 Å) | Cite: | Neck and capsid architecture of the robust Agrobacterium phage Milano. Commun Biol, 6, 2023
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6U5J
| CryoEM Structure of Pyocin R2 - postcontracted - collar | Descriptor: | Collar PA0615, Sheath PA0622 | Authors: | Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H. | Deposit date: | 2019-08-27 | Release date: | 2020-04-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Action of a minimal contractile bactericidal nanomachine. Nature, 580, 2020
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8FQC
| Structure of baseplate with receptor binding complex of Agrobacterium phage Milano | Descriptor: | Baseplate Centerpiece, gp25, Baseplate Central Spike, ... | Authors: | Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H. | Deposit date: | 2023-01-05 | Release date: | 2024-01-31 | Last modified: | 2024-02-07 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano. Nat Commun, 15, 2024
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8FOU
| Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-tube | Descriptor: | Virion-associated protein | Authors: | Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H. | Deposit date: | 2023-01-03 | Release date: | 2024-01-17 | Last modified: | 2024-02-07 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano. Nat Commun, 15, 2024
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8FOY
| Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-sheath | Descriptor: | Tail sheath protein | Authors: | Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H. | Deposit date: | 2023-01-03 | Release date: | 2024-01-17 | Last modified: | 2024-02-07 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano. Nat Commun, 15, 2024
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8FOP
| Structure of Agrobacterium tumefaciens bacteriophage Milano curved tail | Descriptor: | Tail sheath protein, Virion-associated protein | Authors: | Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H. | Deposit date: | 2023-01-03 | Release date: | 2024-01-17 | Last modified: | 2024-02-07 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano. Nat Commun, 15, 2024
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6U5B
| CryoEM Structure of Pyocin R2 - precontracted - baseplate | Descriptor: | Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ... | Authors: | Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H. | Deposit date: | 2019-08-27 | Release date: | 2020-04-15 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Action of a minimal contractile bactericidal nanomachine. Nature, 580, 2020
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4GBF
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4HIZ
| Phage phi92 endosialidase | Descriptor: | 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... | Authors: | Schwarzer, D, Browning, C, Leiman, P.G. | Deposit date: | 2012-10-12 | Release date: | 2014-01-15 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.601 Å) | Cite: | Crystal Structure of Endosialidase from Phage phi92 that cleaves alpha2,8- and alpha2,9-linked polysialic acid To be Published
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4GLY
| Human urokinase-type plasminogen activator uPA in complex with the two-disulfide bridge peptide UK504 | Descriptor: | BICYCLIC PEPTIDE INHIBITOR UK504, CHLORIDE ION, GLYCEROL, ... | Authors: | Buth, S.A, Leiman, P.G, Chen, S, Heinis, C. | Deposit date: | 2012-08-15 | Release date: | 2013-05-15 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.518 Å) | Cite: | Bicyclic Peptide Ligands Pulled out of Cysteine-Rich Peptide Libraries. J.Am.Chem.Soc., 135, 2013
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4JJ2
| High resolution structure of a C-terminal fragment of the T4 phage gp5 beta-helix | Descriptor: | 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ... | Authors: | Buth, S.A, Leiman, P.G, Boudko, S.P. | Deposit date: | 2013-03-07 | Release date: | 2014-03-12 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.28 Å) | Cite: | Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4. Viruses, 7, 2015
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4JIV
| VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5 | Descriptor: | 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ... | Authors: | Buth, S.A, Leiman, P.G, Shneider, M.M. | Deposit date: | 2013-03-07 | Release date: | 2013-08-14 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.903 Å) | Cite: | PAAR-repeat proteins sharpen and diversify the type VI secretion system spike. Nature, 500, 2013
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4JIW
| c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5 | Descriptor: | CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ... | Authors: | Buth, S.A, Leiman, P.G, Shneider, M.M. | Deposit date: | 2013-03-07 | Release date: | 2013-08-14 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3.402 Å) | Cite: | PAAR-repeat proteins sharpen and diversify the type VI secretion system spike. Nature, 500, 2013
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4JK5
| Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Ser) | Descriptor: | 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ... | Authors: | Buth, S.A, Leiman, P.G, Chen, S, Heinis, C. | Deposit date: | 2013-03-09 | Release date: | 2013-07-17 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids. Chembiochem, 14, 2013
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4JK6
| Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Aba) | Descriptor: | 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ... | Authors: | Buth, S.A, Leiman, P.G, Chen, S, Heinis, C. | Deposit date: | 2013-03-09 | Release date: | 2013-07-17 | Last modified: | 2024-07-10 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids. Chembiochem, 14, 2013
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1K28
| The Structure of the Bacteriophage T4 Cell-Puncturing Device | Descriptor: | BASEPLATE STRUCTURAL PROTEIN GP27, PHOSPHATE ION, POTASSIUM ION, ... | Authors: | Kanamaru, S, Leiman, P.G, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Arisaka, F, Rossmann, M.G. | Deposit date: | 2001-09-26 | Release date: | 2002-02-06 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structure of the cell-puncturing device of bacteriophage T4. Nature, 415, 2002
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1PDI
| Fitting of the C-terminal part of the short tail fibers into the cryo-EM reconstruction of T4 baseplate | Descriptor: | Short tail fiber protein | Authors: | Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | Deposit date: | 2003-05-19 | Release date: | 2003-09-09 | Last modified: | 2024-02-14 | Method: | ELECTRON MICROSCOPY (12 Å) | Cite: | Three-dimensional structure of bacteriophage T4 baseplate Nat.Struct.Biol., 10, 2003
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1PDP
| Fitting of gp9 structure into the bacteriophage T4 baseplate cryoEM reconstruction | Descriptor: | Baseplate structural protein Gp9 | Authors: | Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | Deposit date: | 2003-05-19 | Release date: | 2003-09-09 | Last modified: | 2024-02-14 | Method: | ELECTRON MICROSCOPY (12 Å) | Cite: | Three-dimensional structure of the bacteriophage T4 baseplate Nat.Struct.Biol., 10, 2003
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4OSD
| Dimer of a C-terminal fragment of phage T4 gp5 beta-helix | Descriptor: | 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ... | Authors: | Buth, S.A, Leiman, P.G, Shneider, M.M. | Deposit date: | 2014-02-12 | Release date: | 2015-02-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.96 Å) | Cite: | Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4. Viruses, 7, 2015
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4QNL
| Crystal structure of tail fiber protein gp63.1 from E. coli phage G7C | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | Authors: | Riccio, C, Browning, C, Prokhorov, N, Letarov, A, Leiman, P.G. | Deposit date: | 2014-06-18 | Release date: | 2015-06-24 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (2.411 Å) | Cite: | Function of bacteriophage G7C esterase tailspike in host cell adsorption. Mol. Microbiol., 105, 2017
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3FO8
| Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant fragment gp18PR | Descriptor: | ACETATE ION, Tail sheath protein Gp18 | Authors: | Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G. | Deposit date: | 2008-12-29 | Release date: | 2009-03-10 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria. Embo J., 28, 2009
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