Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1ND2
DownloadVisualize
BU of 1nd2 by Molmil
The structure of Rhinovirus 16
Descriptor: MYRISTIC ACID, ZINC ION, coat protein VP1, ...
Authors:Zhang, Y, Simpson, A.A, Bator, C.M, Chakravarty, S, Pevear, D.C, Skochko, G.A, Tull, T.M, Diana, G, Rossmann, M.G.
Deposit date:2002-12-06
Release date:2003-12-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds
J.Virol., 78, 2004
1NCR
DownloadVisualize
BU of 1ncr by Molmil
The structure of Rhinovirus 16 when complexed with pleconaril, an antiviral compound
Descriptor: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, MYRISTIC ACID, ZINC ION, ...
Authors:Zhang, Y, Simpson, A.A, Bator, C.M, Chakravarty, S, Pevear, D.C, Skochko, G.A, Tull, T.M, Diana, G, Rossmann, M.G.
Deposit date:2002-12-05
Release date:2003-12-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds
J.Virol., 78, 2004
1BNT
DownloadVisualize
BU of 1bnt by Molmil
CARBONIC ANHYDRASE II INHIBITOR
Descriptor: 3,4-DIHYDRO-4-HYDROXY-2-(4-METHOXYPHENYL)-2H-THIENO[3,2-E]-1,2-THIAZINE-6-SULFONAMIDE-1,1-DIOXIDE, CARBONIC ANHYDRASE, MERCURY (II) ION, ...
Authors:Boriack-Sjodin, P.A, Zeitlin, S, Christianson, D.W.
Deposit date:1998-07-30
Release date:1999-06-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of inhibitor binding to human carbonic anhydrase II.
Protein Sci., 7, 1998
1WDP
DownloadVisualize
BU of 1wdp by Molmil
The role of an inner loop in the catalytic mechanism of soybean beta-amylase
Descriptor: Beta-amylase, SULFATE ION
Authors:Kang, Y.N, Adachi, M, Utsumi, S, Mikami, B.
Deposit date:2004-05-17
Release date:2005-04-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural analysis of threonine 342 mutants of soybean beta-amylase: role of a conformational change of the inner loop in the catalytic mechanism.
Biochemistry, 44, 2005
1WDQ
DownloadVisualize
BU of 1wdq by Molmil
The role of an inner loop in the catalytic mechanism of soybean beta-amylase
Descriptor: Beta-amylase, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Kang, Y.N, Adachi, M, Utsumi, S, Mikami, B.
Deposit date:2004-05-17
Release date:2005-04-05
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Structural analysis of threonine 342 mutants of soybean beta-amylase: role of a conformational change of the inner loop in the catalytic mechanism.
Biochemistry, 44, 2005
1WDR
DownloadVisualize
BU of 1wdr by Molmil
The role of an inner loop in the catalytic mechanism of soybean beta-amylase
Descriptor: Beta-amylase, SULFATE ION, alpha-D-glucopyranose, ...
Authors:Kang, Y.N, Adachi, M, Utsumi, S, Mikami, B.
Deposit date:2004-05-17
Release date:2005-04-05
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural analysis of threonine 342 mutants of soybean beta-amylase: role of a conformational change of the inner loop in the catalytic mechanism.
Biochemistry, 44, 2005
1BNU
DownloadVisualize
BU of 1bnu by Molmil
CARBONIC ANHYDRASE II INHIBITOR
Descriptor: 3,4-DIHYDRO-4-HYDROXY-2-(2-THIENYMETHYL)-2H-THIENO[3,2-E]-1,2-THIAZINE-6-SULFONAMIDE-1,1-DIOXIDE, CARBONIC ANHYDRASE, MERCURY (II) ION, ...
Authors:Boriack-Sjodin, P.A, Zeitlin, S, Christianson, D.W.
Deposit date:1998-07-30
Release date:1999-06-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of inhibitor binding to human carbonic anhydrase II.
Protein Sci., 7, 1998
3D45
DownloadVisualize
BU of 3d45 by Molmil
Crystal structure of mouse PARN in complex with m7GpppG
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Poly(A)-specific ribonuclease PARN
Authors:Wu, M, Song, H.
Deposit date:2008-05-13
Release date:2009-03-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of m(7)GpppG binding to poly(A)-specific ribonuclease.
Structure, 17, 2009
1BNW
DownloadVisualize
BU of 1bnw by Molmil
CARBONIC ANHYDRASE II INHIBITOR
Descriptor: CARBONIC ANHYDRASE, MERCURY (II) ION, N-(2-THIENYLMETHYL)-2,5-THIOPHENEDISULFONAMIDE, ...
Authors:Boriack-Sjodin, P.A, Zeitlin, S, Christianson, D.W.
Deposit date:1998-07-30
Release date:1999-06-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural analysis of inhibitor binding to human carbonic anhydrase II.
Protein Sci., 7, 1998
1BNM
DownloadVisualize
BU of 1bnm by Molmil
CARBONIC ANHYDRASE II INHIBITOR
Descriptor: (R)-3,4-DIHYDRO-2-(3-METHOXYPHENYL)-4-METHYLAMINO-2H-THIENO[3,2-E]-1,2-THIAZINE-6-SULFONAMIDE-1,1-DIOXIDE, CARBONIC ANHYDRASE, MERCURY (II) ION, ...
Authors:Boriack-Sjodin, P.A, Zeitlin, S, Christianson, D.W.
Deposit date:1998-07-30
Release date:1999-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of inhibitor binding to human carbonic anhydrase II.
Protein Sci., 7, 1998
1BN3
DownloadVisualize
BU of 1bn3 by Molmil
CARBONIC ANHYDRASE II INHIBITOR
Descriptor: 2-(3-METHOXYPHENYL)-2H-THIENO-[3,2-E]-1,2-THIAZINE-6-SULFINAMIDE-1,1-DIOXIDE, CARBONIC ANHYDRASE, MERCURY (II) ION, ...
Authors:Boriack-Sjodin, P.A, Zeitlin, S, Christianson, D.W.
Deposit date:1998-07-31
Release date:1999-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of inhibitor binding to human carbonic anhydrase II.
Protein Sci., 7, 1998
1BNN
DownloadVisualize
BU of 1bnn by Molmil
CARBONIC ANHYDRASE II INHIBITOR
Descriptor: 3,,4-DIHYDRO-2-(3-METHOXYPHENYL)-2H-THIENO-[3,2-E]-1,2-THIAZINE-6-SULFONAMIDE-1,1-DIOXIDE, CARBONIC ANHYDRASE, MERCURY (II) ION, ...
Authors:Boriack-Sjodin, P.A, Zeitlin, S, Christianson, D.W.
Deposit date:1998-07-30
Release date:1999-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of inhibitor binding to human carbonic anhydrase II.
Protein Sci., 7, 1998
4PSQ
DownloadVisualize
BU of 4psq by Molmil
Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with a non-retinoid ligand
Descriptor: (1-benzyl-1H-imidazol-4-yl)[4-(2-chlorophenyl)piperazin-1-yl]methanone, 1,2-ETHANEDIOL, PHOSPHATE ION, ...
Authors:Wang, Z, Johnstone, S, Walker, N.
Deposit date:2014-03-07
Release date:2014-07-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-assisted discovery of the first non-retinoid ligands for Retinol-Binding Protein 4.
Bioorg.Med.Chem.Lett., 24, 2014
1KFA
DownloadVisualize
BU of 1kfa by Molmil
Crystal structure of Fab fragment complexed with gibberellin A4
Descriptor: GIBBERELLIN A4, monoclonal antibody heavy chain, monoclonal antibody light chain
Authors:Murata, T, Fushinobu, S, Nakajima, M, Asami, O, Sassa, T, Wakagi, T, Yamaguchi, I.
Deposit date:2001-11-20
Release date:2002-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the liganded anti-gibberellin A(4) antibody 4-B8(8)/E9 Fab fragment.
Biochem.Biophys.Res.Commun., 293, 2002
4R3C
DownloadVisualize
BU of 4r3c by Molmil
Crystal structure of p38 alpha MAP kinase in complex with a novel isoform selective drug candidate
Descriptor: 4-[3-(4-FLUOROPHENYL)-1H-PYRAZOL-4-YL]PYRIDINE, 6-(4-methylpiperazin-1-yl)-3-(naphthalen-2-yl)-4-(pyridin-4-yl)pyridazine, CHLORIDE ION, ...
Authors:Grum-Tokars, V.L, Minasov, G, Roy, S.M, Anderson, W.F, Watterson, D.M.
Deposit date:2014-08-14
Release date:2015-02-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Targeting human central nervous system protein kinases: An isoform selective p38 alpha MAPK inhibitor that attenuates disease progression in Alzheimer's disease mouse models.
ACS Chem Neurosci, 6, 2015
3VJT
DownloadVisualize
BU of 3vjt by Molmil
Vitamin D receptor complex with a carborane compound
Descriptor: 1-(2-[(R)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane, Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1
Authors:Fujii, S, Masuno, M, Kagechika, H, Nakabayashi, M, Ito, N.
Deposit date:2011-10-31
Release date:2012-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane
J.Am.Chem.Soc., 133, 2011
3VJS
DownloadVisualize
BU of 3vjs by Molmil
Vitamin D receptor complex with a carborane compound
Descriptor: 1-(2-[(S)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane, Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1
Authors:Fujii, S, Masuno, M, Kagechika, H, Nakabayashi, M, Ito, N.
Deposit date:2011-10-31
Release date:2012-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane
J.Am.Chem.Soc., 133, 2011
5X6T
DownloadVisualize
BU of 5x6t by Molmil
N-terminal Zinc Finger of Synaptotagmin-like Protein 4
Descriptor: Synaptotagmin-like protein 4, ZINC ION
Authors:Miyamoto, K.
Deposit date:2017-02-23
Release date:2017-10-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The unique N-terminal zinc finger of synaptotagmin-like protein 4 reveals FYVE structure
Protein Sci., 26, 2017
3AUJ
DownloadVisualize
BU of 3auj by Molmil
Structure of diol dehydratase complexed with glycerol
Descriptor: CALCIUM ION, COBALAMIN, Diol dehydrase alpha subunit, ...
Authors:Yamanishi, M, Kinoshita, K, Fukuoka, M, Shibata, T, Tobimatsu, T, Toraya, T.
Deposit date:2011-02-07
Release date:2012-02-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Redesign of coenzyme B(12) dependent diol dehydratase to be resistant to the mechanism-based inactivation by glycerol and act on longer chain 1,2-diols
Febs J., 279, 2012
1HCS
DownloadVisualize
BU of 1hcs by Molmil
NMR STRUCTURE OF THE HUMAN SRC SH2 DOMAIN COMPLEX
Descriptor: ACETYL-PYEEIE-OH, HUMAN SRC
Authors:Gampe Junior, R.T, Xu, R.X.
Deposit date:1994-09-02
Release date:1995-09-15
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the human pp60c-src SH2 domain complexed with a phosphorylated tyrosine pentapeptide.
Biochemistry, 34, 1995
1HCT
DownloadVisualize
BU of 1hct by Molmil
NMR STRUCTURE OF THE HUMAN SRC SH2 DOMAIN COMPLEX
Descriptor: ACETYL-PYEEIE-OH, HUMAN SRC
Authors:Gampe Junior, R.T, Xu, R.X.
Deposit date:1994-09-02
Release date:1995-09-15
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the human pp60c-src SH2 domain complexed with a phosphorylated tyrosine pentapeptide.
Biochemistry, 34, 1995
5W08
DownloadVisualize
BU of 5w08 by Molmil
A/Texas/50/2012(H3N2) Influenza hemagglutinin in complex with K03.12 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:McCarthy, K.R, Harrison, S.C.
Deposit date:2017-05-30
Release date:2018-02-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Memory B Cells that Cross-React with Group 1 and Group 2 Influenza A Viruses Are Abundant in Adult Human Repertoires.
Immunity, 48, 2018
5W0D
DownloadVisualize
BU of 5w0d by Molmil
Inferred precursor (UCA) of the human antibody lineage K03.12 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:McCarthy, K.R, Harrison, S.C.
Deposit date:2017-05-30
Release date:2018-02-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Memory B Cells that Cross-React with Group 1 and Group 2 Influenza A Viruses Are Abundant in Adult Human Repertoires.
Immunity, 48, 2018
5B5K
DownloadVisualize
BU of 5b5k by Molmil
Crystal structure of Izumo1, the mammalian sperm ligand for egg Juno
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Izumo sperm-egg fusion protein 1
Authors:Nishimura, K, Han, L, De Sanctis, D, Jovine, L.
Deposit date:2016-05-11
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of sperm Izumo1 reveals unexpected similarities with Plasmodium invasion proteins.
Curr.Biol., 26, 2016
7E0G
DownloadVisualize
BU of 7e0g by Molmil
Crystal structure of Lysine Specific Demethylase 1 (LSD1) with TAK-418, FAD-adduct
Descriptor: GLYCEROL, IMIDAZOLE, Lysine-specific histone demethylase 1A, ...
Authors:Oki, H.
Deposit date:2021-01-28
Release date:2021-03-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:LSD1 enzyme inhibitor TAK-418 unlocks aberrant epigenetic machinery and improves autism symptoms in neurodevelopmental disorder models.
Sci Adv, 7, 2021

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon