Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6P9S
DownloadVisualize
BU of 6p9s by Molmil
E.coli LpxA in complex with UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc and Compound 7
Descriptor: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, DIMETHYL SULFOXIDE, PHOSPHATE ION, ...
Authors:Ma, X, Shia, S, Ornelas, E.
Deposit date:2019-06-10
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two Distinct Mechanisms of Inhibition of LpxA Acyltransferase Essential for Lipopolysaccharide Biosynthesis.
J.Am.Chem.Soc., 142, 2020
6P9Q
DownloadVisualize
BU of 6p9q by Molmil
E.coli LpxA in complex with UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc and Compound 2
Descriptor: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, DIMETHYL SULFOXIDE, PHOSPHATE ION, ...
Authors:Ma, X, Shia, S, Ornelas, E.
Deposit date:2019-06-10
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two Distinct Mechanisms of Inhibition of LpxA Acyltransferase Essential for Lipopolysaccharide Biosynthesis.
J.Am.Chem.Soc., 142, 2020
6WE5
DownloadVisualize
BU of 6we5 by Molmil
Crystal structure of an inorganic pyrophosphatase from Chlamydia trachomatis D/UW-3/Cx
Descriptor: Inorganic pyrophosphatase, SODIUM ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-04-01
Release date:2020-04-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of an inorganic pyrophosphatase from Chlamydia trachomatis D/UW-3/Cx.
Acta Crystallogr.,Sect.F, 78, 2022
6WSA
DownloadVisualize
BU of 6wsa by Molmil
Crystal structure of a betaine aldehyde dehydrogenase from Burkholderia pseudomallei without cofactor
Descriptor: 1,2-ETHANEDIOL, NAD/NADP-dependent betaine aldehyde dehydrogenase, SODIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-04-30
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of betaine aldehyde dehydrogenase from Burkholderia pseudomallei.
Acta Crystallogr.,Sect.F, 78, 2022
6WSB
DownloadVisualize
BU of 6wsb by Molmil
Crystal structure of a betaine aldehyde dehydrogenase from Burkholderia pseudomallei bound to cofactor NAD
Descriptor: GLYCEROL, NAD/NADP-dependent betaine aldehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-04-30
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of betaine aldehyde dehydrogenase from Burkholderia pseudomallei.
Acta Crystallogr.,Sect.F, 78, 2022
7KZF
DownloadVisualize
BU of 7kzf by Molmil
High resolution cryo EM analysis of HPV16 identifies minor structural protein L2 and describes capsid flexibility
Descriptor: Major capsid protein L1
Authors:Hartmann, S.R, Goetschius, D.J, Hafenstein, S.
Deposit date:2020-12-10
Release date:2021-02-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High resolution cryo EM analysis of HPV16 identifies minor structural protein L2 and describes capsid flexibility.
Sci Rep, 11, 2021
6N0Q
DownloadVisualize
BU of 6n0q by Molmil
BRAF in complex with N-(4-methyl-3-(1-methyl-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-5-yl)phenyl)-3-(trifluoromethyl)benzamide.
Descriptor: N-[4-methyl-3-(1-methyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)phenyl]-3-(trifluoromethyl)benzamide, Serine/threonine-protein kinase B-raf
Authors:Mamo, M, Appleton, B.A.
Deposit date:2018-11-07
Release date:2019-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Design and Discovery ofN-(3-(2-(2-Hydroxyethoxy)-6-morpholinopyridin-4-yl)-4-methylphenyl)-2-(trifluoromethyl)isonicotinamide, a Selective, Efficacious, and Well-Tolerated RAF Inhibitor Targeting RAS Mutant Cancers: The Path to the Clinic.
J.Med.Chem., 63, 2020
6OK4
DownloadVisualize
BU of 6ok4 by Molmil
Crystal Structure of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from Chlamydia trachomatis with bound NAD
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of glyceraldehyde 3-phosphate dehydrogenase in Neisseria gonorrhoeae and Chlamydia trachomatis.
Protein Sci., 29, 2020
5BT9
DownloadVisualize
BU of 5bt9 by Molmil
Crystal Structure of FolM Alternative dihydrofolate reductase 1 from Brucella canis complexed with NADP
Descriptor: 3-oxoacyl-(Acyl-carrier-protein) reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-06-02
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of FolM alternative dihydrofolate reductase 1 from Brucella suis and Brucella canis.
Acta Crystallogr.,Sect.F, 78, 2022
5TS9
DownloadVisualize
BU of 5ts9 by Molmil
Crystal structure of Chorismate mutase from Burkholderia phymatum
Descriptor: Chorismate mutase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-10-28
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of chorismate mutase from Burkholderia phymatum.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5TGD
DownloadVisualize
BU of 5tgd by Molmil
Crystal structure of FolM Alternative dihydrofolate reductase 1 from Brucella suis in complex with NADP
Descriptor: 1,2-ETHANEDIOL, FolM Alternative dihydrofolate reductase, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-09-27
Release date:2016-10-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of FolM alternative dihydrofolate reductase 1 from Brucella suis and Brucella canis.
Acta Crystallogr.,Sect.F, 78, 2022
3R20
DownloadVisualize
BU of 3r20 by Molmil
Crystal structure of cytidylate kinase from Mycobacterium smegmatis
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Cytidylate kinase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-03-11
Release date:2011-04-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
7RGR
DownloadVisualize
BU of 7rgr by Molmil
Lysozyme 056 from Deep neural language modeling
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Artificial protein L056, CHLORIDE ION
Authors:Fraser, J.S, Holton, J.M, Olmos Jr, J.L, Greene, E.R.
Deposit date:2021-07-15
Release date:2021-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Large language models generate functional protein sequences across diverse families.
Nat.Biotechnol., 2023
7TMF
DownloadVisualize
BU of 7tmf by Molmil
Crystal Structure of NAD(P)H nitroreductase from Klebsiella pneumoniae (short b-axis)
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-01-19
Release date:2022-02-02
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structures of NAD(P)H nitroreductases from Klebsiella pneumoniae
Acta Crystallogr.,Sect.F, F80, 2024
6B8J
DownloadVisualize
BU of 6b8j by Molmil
Co-structure of human glycogen synthase kinase beta with a selective (5-imidazol-2-yl-4-phenylpyrimidin-2-yl)[2-(2-pyridylamino)ethyl]amine inhibitor
Descriptor: CHIR99021, GLYCEROL, Glycogen synthase kinase-3 beta, ...
Authors:Bussiere, D.E.
Deposit date:2017-10-08
Release date:2017-11-08
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:Synthesis, Binding Mode, and Antihyperglycemic Activity of Potent and Selective (5-Imidazol-2-yl-4-phenylpyrimidin-2-yl)[2-(2-pyridylamino)ethyl]amine Inhibitors of Glycogen Synthase Kinase 3.
J. Med. Chem., 60, 2017
6B1Z
DownloadVisualize
BU of 6b1z by Molmil
Crystal Structure of Glutamate-tRNA Synthetase from Elizabethkingia anophelis
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Glutamate--tRNA ligase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-09-19
Release date:2017-10-04
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of glutamyl-tRNA synthetase from Elizabethkingia anopheles and E. meningosepticum.
Acta Crystallogr.,Sect.F, 78, 2022
6BRL
DownloadVisualize
BU of 6brl by Molmil
Crystal structure of a glutamate tRNA ligase from Elizabethkingia meningosepticum CCUG26117 in complex with its amino acid
Descriptor: 1,2-ETHANEDIOL, GLUTAMIC ACID, Glutamate tRNA ligase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-11-30
Release date:2018-01-17
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of glutamyl-tRNA synthetase from Elizabethkingia anopheles and E. meningosepticum.
Acta Crystallogr.,Sect.F, 78, 2022
7XKY
DownloadVisualize
BU of 7xky by Molmil
Crystal structure of Methanocaldococcus jannaschii two-subunit Fumarate hydratase apo-protein complex
Descriptor: Fumarate hydratase
Authors:Bellur, A, Jayaraman, V, Balaram, H.
Deposit date:2022-04-20
Release date:2023-02-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Revisiting the Burden Borne by Fumarase: Enzymatic Hydration of an Olefin.
Biochemistry, 62, 2023
5DNI
DownloadVisualize
BU of 5dni by Molmil
Crystal structure of Methanocaldococcus jannaschii Fumarate hydratase beta subunit
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Jayaraman, V, Kunala, J, Balaram, H.
Deposit date:2015-09-10
Release date:2016-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Revisiting the Burden Borne by Fumarase: Enzymatic Hydration of an Olefin.
Biochemistry, 62, 2023
5LS6
DownloadVisualize
BU of 5ls6 by Molmil
Structure of Human Polycomb Repressive Complex 2 (PRC2) with inhibitor
Descriptor: 1-[(1~{R})-1-[1-[2,2-bis(fluoranyl)propyl]piperidin-4-yl]ethyl]-~{N}-[(4-methoxy-6-methyl-2-oxidanylidene-3~{H}-pyridin-3-yl)methyl]-2-methyl-indole-3-carboxamide, Histone-lysine N-methyltransferase EZH2,Histone-lysine N-methyltransferase EZH2,Histone-lysine N-methyltransferase EZH2, Jarid2 K116me3, ...
Authors:Zhang, Y, Justin, N, Chen, S, Wilson, J, Gamblin, S.
Deposit date:2016-08-22
Release date:2017-02-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:Identification of (R)-N-((4-Methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl)-2-methyl-1-(1-(1-(2,2,2-trifluoroethyl)piperidin-4-yl)ethyl)-1H-indole-3-carboxamide (CPI-1205), a Potent and Selective Inhibitor of Histone Methyltransferase EZH2, Suitable for Phase I Clinical Trials for B-Cell Lymphomas.
J. Med. Chem., 59, 2016
5VHD
DownloadVisualize
BU of 5vhd by Molmil
DHX36 with an N-terminal truncation bound to ADP-AlF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DEAH (Asp-Glu-Ala-His) box polypeptide 36, TETRAFLUOROALUMINATE ION
Authors:Chen, M, Ferre-D'Amare, A.
Deposit date:2017-04-13
Release date:2018-06-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018
5VHA
DownloadVisualize
BU of 5vha by Molmil
DHX36 with an N-terminal truncation
Descriptor: DEAH (Asp-Glu-Ala-His) box polypeptide 36
Authors:Chen, M, Ferre-D'Amare, A.
Deposit date:2017-04-12
Release date:2018-06-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.227 Å)
Cite:Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018
7D40
DownloadVisualize
BU of 7d40 by Molmil
Crystal structure of GATase subunit of Methanocaldococcus jannaschii GMP synthetase
Descriptor: GMP synthase [glutamine-hydrolyzing] subunit A
Authors:Bellur, A, Dongre, A, Kumar, S, Balaram, H.
Deposit date:2020-09-21
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for the hyperthermostability of an archaeal enzyme induced by succinimide formation.
Biophys.J., 120, 2021
7D95
DownloadVisualize
BU of 7d95 by Molmil
Crystal structure of acivicin-bound GATase subunit of Methanocaldococcus jannaschii GMP synthetase
Descriptor: GMP synthase [glutamine-hydrolyzing] subunit A
Authors:Bellur, A, Dongre, A, Kumar, S, Balaram, H.
Deposit date:2020-10-12
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for the hyperthermostability of an archaeal enzyme induced by succinimide formation.
Biophys.J., 120, 2021
5VHE
DownloadVisualize
BU of 5vhe by Molmil
DHX36 in complex with the c-Myc G-quadruplex
Descriptor: DEAH (Asp-Glu-Ala-His) box polypeptide 36, DNA (5'-D(*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*TP*TP*TP*TP*T)-3'), POTASSIUM ION
Authors:Chen, M, Ferre-D'Amare, A.
Deposit date:2017-04-13
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.793 Å)
Cite:Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Nature, 558, 2018

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon