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6DL7
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BU of 6dl7 by Molmil
Human mitochondrial ClpP in complex with ONC201 (TIC10)
Descriptor: 7-benzyl-4-[(2-methylphenyl)methyl]-6,7,8,9-tetrahydroimidazo[1,2-a]pyrido[3,4-e]pyrimidin-5(4H)-one, ATP-dependent Clp protease proteolytic subunit, mitochondrial
Authors:Halgas, O, Zarabi, S.F, Schimmer, A, Pai, E.F.
Deposit date:2018-05-31
Release date:2019-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mitochondrial ClpP-Mediated Proteolysis Induces Selective Cancer Cell Lethality.
Cancer Cell, 35, 2019
6LXU
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BU of 6lxu by Molmil
Crystal structure of methionine gamma-lyase from Fusobacterium nucleatum
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, L-methionine gamma-lyase, NITRATE ION
Authors:Kezuka, Y, Yoshida, Y, Nonaka, T.
Deposit date:2020-02-12
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Crystal structure of methionine gamma-lyase from Fusobacterium nucleatum
To Be Published
7N82
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BU of 7n82 by Molmil
NMR Solution structure of Se0862
Descriptor: Biofilm-related protein
Authors:Zhang, N, LiWang, A.L.
Deposit date:2021-06-11
Release date:2021-07-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2.
Proteins, 89, 2021
3OGN
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BU of 3ogn by Molmil
Crystal Structure of an Odorant-binding Protein from the Southern House Mosquito Complexed with an Oviposition Pheromone
Descriptor: (1S)-1-[(2R)-6-oxotetrahydro-2H-pyran-2-yl]undecyl acetate, MAGNESIUM ION, Odorant-binding protein
Authors:Mao, Y, Clardy, J.
Deposit date:2010-08-17
Release date:2010-11-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal and solution structures of an odorant-binding protein from the southern house mosquito complexed with an oviposition pheromone.
Proc.Natl.Acad.Sci.USA, 107, 2010
1GIB
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BU of 1gib by Molmil
MU-CONOTOXIN GIIIB, NMR
Descriptor: MU-CONOTOXIN GIIIB
Authors:Hill, J.M, Alewood, P.F, Craik, D.J.
Deposit date:1996-04-17
Release date:1996-11-08
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of mu-conotoxin GIIIB, a specific blocker of skeletal muscle sodium channels.
Biochemistry, 35, 1996
1HAK
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BU of 1hak by Molmil
CRYSTAL STRUCTURE OF RECOMBINANT HUMAN PLACENTAL ANNEXIN V COMPLEXED WITH K-201 AS A CALCIUM CHANNEL ACTIVITY INHIBITOR
Descriptor: 4-[3-{1-(4-BENZYL)PIPERODINYL}PROPIONYL]-7-METHOXY-2,3,4,5-TERTRAHYDRO-1,4-BENZOTHIAZEPINE, ANNEXIN V
Authors:Ago, H, Inagaki, E, Miyano, M.
Deposit date:1997-12-10
Release date:1999-02-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of annexin V with its ligand K-201 as a calcium channel activity inhibitor.
J.Mol.Biol., 274, 1997
6MRR
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BU of 6mrr by Molmil
De novo designed protein Foldit1
Descriptor: Foldit1
Authors:Koepnick, B, Bick, M.J, Estep, R.D, Kleinfelter, S, Wei, L, Baker, D.
Deposit date:2018-10-15
Release date:2019-06-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:De novo protein design by citizen scientists.
Nature, 570, 2019
6MRS
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BU of 6mrs by Molmil
De novo designed protein Peak6
Descriptor: Peak6, SULFATE ION
Authors:Koepnick, B, Boykov, A, Baker, D.
Deposit date:2018-10-15
Release date:2019-06-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.541 Å)
Cite:De novo protein design by citizen scientists.
Nature, 570, 2019
6NUK
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BU of 6nuk by Molmil
De novo designed protein Ferredog-Diesel
Descriptor: Ferredog-Diesel
Authors:Koepnick, B, Bick, M.J, DiMaio, F, Norgard-Solano, T, Baker, D.
Deposit date:2019-02-01
Release date:2019-06-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:De novo protein design by citizen scientists.
Nature, 570, 2019
7WKI
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BU of 7wki by Molmil
Structure of the ultra-affinity complex between CFH and a nanobody
Descriptor: Anti-CFH nanobody (VHH), Complement factor H
Authors:Caaveiro, J.M.M, Yokoo, T, Tsumoto, K.
Deposit date:2022-01-10
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Antibody recognition of complement factor H reveals a flexible loop involved in atypical hemolytic uremic syndrome pathogenesis.
J.Biol.Chem., 298, 2022
4INW
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BU of 4inw by Molmil
Structure of Pheromone-binding protein 1 in complex with (11Z,13Z)-hexadecadienal
Descriptor: (11Z,13Z)-hexadeca-11,13-dienal, Pheromone-binding protein 1
Authors:di Luccio, E, Wilson, D.K.
Deposit date:2013-01-07
Release date:2013-03-06
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Crystallographic Observation of pH-Induced Conformational Changes in the Amyelois transitella Pheromone-Binding Protein AtraPBP1.
Plos One, 8, 2013
4INX
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BU of 4inx by Molmil
Structure of Pheromone-binding protein 1 in complex with (Z,Z)-11,13- hexadecadienol
Descriptor: (11Z,13Z)-hexadeca-11,13-dien-1-ol, Pheromone-binding protein 1
Authors:di Luccio, E, Wilson, D.K.
Deposit date:2013-01-07
Release date:2013-03-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Crystallographic Observation of pH-Induced Conformational Changes in the Amyelois transitella Pheromone-Binding Protein AtraPBP1.
Plos One, 8, 2013
1XFR
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BU of 1xfr by Molmil
Solution structure of the Bombyx mori pheromone-binding protein fragment BmPBP(1-128) at pH 6.5
Descriptor: Pheromone-binding protein
Authors:Michel, E, Damberger, F.F, Leal, W.S, Wuthrich, K.
Deposit date:2004-09-15
Release date:2005-09-27
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Dynamic conformational equilibria in the physiological function of the Bombyx mori pheromone-binding protein.
J. Mol. Biol., 408, 2011
3I7V
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BU of 3i7v by Molmil
Crystal structure of AP4A hydrolase complexed with AP4A (ATP) (aq_158) from Aquifex aeolicus Vf5
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, AP4A hydrolase, ...
Authors:Jeyakanthan, J, Kanaujia, S.P, Nakagawa, N, Sekar, K, Kuramitsu, S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-07-09
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Free and ATP-bound structures of Ap(4)A hydrolase from Aquifex aeolicus V5
Acta Crystallogr.,Sect.D, 66, 2010
3I7U
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BU of 3i7u by Molmil
Crystal structure of AP4A hydrolase (aq_158) from Aquifex aeolicus VF5
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AP4A hydrolase, ...
Authors:Jeyakanthan, J, Kanaujia, S.P, Nakagawa, N, Sekar, K, Kuramitsu, S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-07-09
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Free and ATP-bound structures of Ap(4)A hydrolase from Aquifex aeolicus V5
Acta Crystallogr.,Sect.D, 66, 2010
2KPH
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BU of 2kph by Molmil
NMR Structure of AtraPBP1 at pH 4.5
Descriptor: Pheromone binding protein
Authors:Ames, J.
Deposit date:2009-10-15
Release date:2010-02-02
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:NMR Structure of Navel Orangeworm Moth Pheromone-Binding Protein (AtraPBP1): Implications for pH-Sensitive Pheromone Detection .
Biochemistry, 49, 2010
2ZQE
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BU of 2zqe by Molmil
Crystal structure of the Smr domain of Thermus thermophilus MutS2
Descriptor: MutS2 protein
Authors:Fukui, K, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2008-08-08
Release date:2008-09-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of MutS2 endonuclease domain and the mechanism of homologous recombination suppression
J.Biol.Chem., 283, 2008
7FG2
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BU of 7fg2 by Molmil
Minor cryo-EM structure of S protein trimer of SARS-CoV2 with K-874A VHH, composite map
Descriptor: K-874A VHH, Spike glycoprotein
Authors:Song, C, Murata, K, Katayama, K.
Deposit date:2021-07-25
Release date:2021-09-29
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Nasal delivery of single-domain antibody improves symptoms of SARS-CoV-2 infection in an animal model.
Plos Pathog., 17, 2021
7FG3
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BU of 7fg3 by Molmil
Major cryo-EM structure of S protein trimer of SARS-CoV2 with K-874, composite map
Descriptor: K-874A VHH, Spike glycoprotein
Authors:Song, C, Katayama, K, Murata, K.
Deposit date:2021-07-25
Release date:2021-09-29
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Nasal delivery of single-domain antibody improves symptoms of SARS-CoV-2 infection in an animal model.
Plos Pathog., 17, 2021
7FG7
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BU of 7fg7 by Molmil
Cryo-EM structure of S protein trimer of SARS-CoV2
Descriptor: Spike glycoprotein
Authors:Song, C, Murata, K, Katayama, K.
Deposit date:2021-07-26
Release date:2021-09-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Nasal delivery of single-domain antibody improves symptoms of SARS-CoV-2 infection in an animal model.
Plos Pathog., 17, 2021
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