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7VY5
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BU of 7vy5 by Molmil
Coxsackievirus B3 (VP3-234Q) incubation with CD55 at pH7.4
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Wang, Q.L, Liu, C.C.
Deposit date:2021-11-13
Release date:2022-01-19
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Molecular basis of differential receptor usage for naturally occurring CD55-binding and -nonbinding coxsackievirus B3 strains.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VXZ
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BU of 7vxz by Molmil
Coxsackievirus B3 at pH7.4 (VP3-234Q) incubation with coxsackievirus and adenovirus receptor for 20min
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Wang, Q.L, Liu, C.C.
Deposit date:2021-11-13
Release date:2022-01-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Molecular basis of differential receptor usage for naturally occurring CD55-binding and -nonbinding coxsackievirus B3 strains.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XXG
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BU of 7xxg by Molmil
Echo 18 at pH5.5
Descriptor: PALMITIC ACID, VP1, VP2, ...
Authors:Liu, C.C, Qu, X.
Deposit date:2022-05-30
Release date:2022-06-29
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Human FcRn Is a Two-in-One Attachment-Uncoating Receptor for Echovirus 18.
Mbio, 13, 2022
7XXJ
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BU of 7xxj by Molmil
Echo 18 incubated with FcRn at pH5.5
Descriptor: PALMITIC ACID, VP1, VP2, ...
Authors:Liu, C.C, Qu, X.
Deposit date:2022-05-30
Release date:2022-06-29
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Human FcRn Is a Two-in-One Attachment-Uncoating Receptor for Echovirus 18.
Mbio, 13, 2022
7XXA
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BU of 7xxa by Molmil
Complex of Echo 18 and FcRn at pH7.4
Descriptor: IgG receptor FcRn large subunit p51, VP1, VP2, ...
Authors:Liu, C.C, Qu, X.
Deposit date:2022-05-29
Release date:2022-06-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Human FcRn Is a Two-in-One Attachment-Uncoating Receptor for Echovirus 18.
Mbio, 13, 2022
8HFY
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BU of 8hfy by Molmil
SARS-CoV-2 Omicron BA.1 spike protein receptor-binding domain in complex with white-tailed deer ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
Authors:Han, P, Meng, Y.M, Qi, J.X.
Deposit date:2022-11-13
Release date:2023-08-30
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural basis of white-tailed deer, Odocoileus virginianus , ACE2 recognizing all the SARS-CoV-2 variants of concern with high affinity.
J.Virol., 97, 2023
8HFX
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BU of 8hfx by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with white-tailed deer ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
Authors:Han, P, Meng, Y.M, Qi, J.X.
Deposit date:2022-11-13
Release date:2023-08-30
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural basis of white-tailed deer, Odocoileus virginianus , ACE2 recognizing all the SARS-CoV-2 variants of concern with high affinity.
J.Virol., 97, 2023
8HG0
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BU of 8hg0 by Molmil
Cryo-EM structure of SARS-CoV-2 prototype spike protein receptor-binding domain in complex with white-tailed deer ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, Spike protein S1, ...
Authors:Han, P, Meng, Y.M, Qi, J.X.
Deposit date:2022-11-13
Release date:2023-08-30
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.51 Å)
Cite:Structural basis of white-tailed deer, Odocoileus virginianus , ACE2 recognizing all the SARS-CoV-2 variants of concern with high affinity.
J.Virol., 97, 2023
8HFZ
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BU of 8hfz by Molmil
Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with white-tailed deer ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
Authors:Han, P, Meng, Y.M, Qi, J.X.
Deposit date:2022-11-13
Release date:2023-08-30
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural basis of white-tailed deer, Odocoileus virginianus , ACE2 recognizing all the SARS-CoV-2 variants of concern with high affinity.
J.Virol., 97, 2023
8HWT
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BU of 8hwt by Molmil
SARS-CoV-2 Omicron BA.2 RBD complexed with BD-604 and S304 Fab
Descriptor: BD-604 heavy chain, BD-604 light chain, S304 heavy chain, ...
Authors:He, Q.W, Xie, Y.
Deposit date:2023-01-02
Release date:2023-12-06
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:An updated atlas of antibody evasion by SARS-CoV-2 Omicron sub-variants including BQ.1.1 and XBB.
Cell Rep Med, 4, 2023
8HWS
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BU of 8hws by Molmil
The complex structure of Omicron BA.4 RBD with BD604, S309, and S304
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BD-604 Fab Heavy chain, BD-604 Fab Light chain, ...
Authors:He, Q.W, Xu, Z.P, Xie, Y.F.
Deposit date:2023-01-02
Release date:2023-12-06
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:An updated atlas of antibody evasion by SARS-CoV-2 Omicron sub-variants including BQ.1.1 and XBB.
Cell Rep Med, 4, 2023
7C9T
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BU of 7c9t by Molmil
Echovirus 30 A-particle
Descriptor: VP1, VP2, VP3
Authors:Wang, K, Zhu, L, Sun, Y, Li, M, Zhao, X, Cui, L, Zhang, L, Gao, G, Zhai, W, Zhu, F, Rao, Z, Wang, X.
Deposit date:2020-06-07
Release date:2020-07-29
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of Echovirus 30 in complex with its receptors inform a rational prediction for enterovirus receptor usage.
Nat Commun, 11, 2020
8XHF
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BU of 8xhf by Molmil
Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Sun, J, Zheng, T.Y.
Deposit date:2023-12-17
Release date:2024-12-18
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 low pathogenicity avian influenza virus.
Nat Commun, 15, 2024
8XR9
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BU of 8xr9 by Molmil
Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose
Authors:Sun, J, Zheng, T.Y.
Deposit date:2024-01-06
Release date:2025-01-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 low pathogenicity avian influenza virus.
Nat Commun, 15, 2024
8XRD
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BU of 8xrd by Molmil
Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Sun, J, Zheng, T.Y.
Deposit date:2024-01-06
Release date:2025-01-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 low pathogenicity avian influenza virus.
Nat Commun, 15, 2024
8XRA
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BU of 8xra by Molmil
Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid, ...
Authors:Sun, J, Zheng, T.Y.
Deposit date:2024-01-06
Release date:2025-01-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 low pathogenicity avian influenza virus.
Nat Commun, 15, 2024
8XR8
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BU of 8xr8 by Molmil
Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Sun, J, Zheng, T.Y.
Deposit date:2024-01-06
Release date:2025-01-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 low pathogenicity avian influenza virus.
Nat Commun, 15, 2024
8XRB
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BU of 8xrb by Molmil
Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Sun, J, Zheng, T.Y.
Deposit date:2024-01-06
Release date:2025-01-15
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 low pathogenicity avian influenza virus.
Nat Commun, 15, 2024
8XRC
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BU of 8xrc by Molmil
Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Sun, J, Zheng, T.Y.
Deposit date:2024-01-06
Release date:2025-01-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 low pathogenicity avian influenza virus.
Nat Commun, 15, 2024
8XR7
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BU of 8xr7 by Molmil
Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Sun, J, Zheng, T.Y.
Deposit date:2024-01-06
Release date:2025-01-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 low pathogenicity avian influenza virus.
Nat Commun, 15, 2024
8Z08
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BU of 8z08 by Molmil
The structure of HLA-A*2402 complex with peptide from SARS-CoV-2 S448-456 NYNYQYRLF(BA.2.12.1)
Descriptor: ASN-TYR-ASN-TYR-GLN-TYR-ARG-LEU-PHE, Beta-2-microglobulin, MHC class I antigen
Authors:Zhang, J.N, Liu, J.
Deposit date:2024-04-09
Release date:2025-01-29
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:T cell immune evasion by SARS-CoV-2 JN.1 escapees targeting two cytotoxic T cell epitope hotspots.
Nat.Immunol., 26, 2025
8Z07
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BU of 8z07 by Molmil
The structure of HLA-A*2402 complex with peptide from SARS-CoV-2 S448-456 NYNYRYRLF(Delta/BA.5.2)
Descriptor: Beta-2-microglobulin, MHC class I antigen, Spike protein S2'
Authors:Yuechao, H, Liu, J.
Deposit date:2024-04-09
Release date:2025-01-29
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:T cell immune evasion by SARS-CoV-2 JN.1 escapees targeting two cytotoxic T cell epitope hotspots.
Nat.Immunol., 26, 2025
8YZZ
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BU of 8yzz by Molmil
The structure of HLA-A*2402 complex with peptide from SARS-CoV-2 S448-456 NYNYLYRLF(Prototype)
Descriptor: Beta-2-microglobulin, MHC class I antigen, Spike protein S1
Authors:Shang, B.L, Zhang, J.N, Tian, J.M, Liu, J.
Deposit date:2024-04-08
Release date:2025-01-29
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:T cell immune evasion by SARS-CoV-2 JN.1 escapees targeting two cytotoxic T cell epitope hotspots.
Nat.Immunol., 26, 2025
8Z06
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BU of 8z06 by Molmil
The structure of HLA-A*2402 complex with peptide from SARS-CoV-2 S448-456 NYDYWYRSF(JN.1)
Descriptor: Beta-2-microglobulin, MHC class I antigen, Spike protein S2'
Authors:Tian, J.M, Liu, J.
Deposit date:2024-04-09
Release date:2025-01-29
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:T cell immune evasion by SARS-CoV-2 JN.1 escapees targeting two cytotoxic T cell epitope hotspots.
Nat.Immunol., 26, 2025
8Z05
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BU of 8z05 by Molmil
The structure of HLA-A*0201 complex with peptide from SARS-CoV-2 N222-230 LLLDRLNKL(BA.2.86/JN.1)
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A alpha chain, ...
Authors:Zhang, J.N, Tian, J.M, Liu, J.
Deposit date:2024-04-09
Release date:2025-01-29
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:T cell immune evasion by SARS-CoV-2 JN.1 escapees targeting two cytotoxic T cell epitope hotspots.
Nat.Immunol., 26, 2025

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PDB entries from 2025-07-16

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