Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3JPX
DownloadVisualize
BU of 3jpx by Molmil
EED: A Novel Histone Trimethyllysine Binder Within The EED-EZH2 Polycomb Complex
Descriptor: HISTONE PEPTIDE, Polycomb protein EED
Authors:Xu, C, Bian, C.B, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-09-04
Release date:2009-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).
Proc.Natl.Acad.Sci.USA, 107, 2010
3JZH
DownloadVisualize
BU of 3jzh by Molmil
EED-H3K79me3
Descriptor: HISTONE PEPTIDE, Polycomb protein EED
Authors:Xu, C, Bian, C.B, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-09-23
Release date:2009-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).
Proc.Natl.Acad.Sci.USA, 107, 2010
3K27
DownloadVisualize
BU of 3k27 by Molmil
Complex structure of EED and trimethylated H3K9
Descriptor: HISTONE PEPTIDE, Polycomb protein EED
Authors:Bian, C.B, Xu, C, Qiu, W, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-09-29
Release date:2009-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).
Proc.Natl.Acad.Sci.USA, 107, 2010
3JZG
DownloadVisualize
BU of 3jzg by Molmil
Structure of EED in complex with H3K27me3
Descriptor: HISTONE PEPTIDE, Polycomb protein EED
Authors:Xu, C, Bian, C.B, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-09-23
Release date:2009-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).
Proc.Natl.Acad.Sci.USA, 107, 2010
5WJM
DownloadVisualize
BU of 5wjm by Molmil
Crystal Structure of Mouse Cadherin-23 EC17-18
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Cadherin-23, ...
Authors:De-la-Torre, P, Sotomayor, M.
Deposit date:2017-07-23
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
6MFO
DownloadVisualize
BU of 6mfo by Molmil
Crystal Structure of Human Protocadherin-15 EC1-3 G16D N369D Q370N
Descriptor: CALCIUM ION, Protocadherin-15
Authors:Choudhary, D, Sotomayor, M.
Deposit date:2018-09-11
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 2020
3K26
DownloadVisualize
BU of 3k26 by Molmil
Complex structure of EED and trimethylated H3K4
Descriptor: HISTONE PEPTIDE, Polycomb protein EED
Authors:Bian, C.B, Xu, C, Qiu, W, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-09-29
Release date:2009-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).
Proc.Natl.Acad.Sci.USA, 107, 2010
5W1D
DownloadVisualize
BU of 5w1d by Molmil
Crystal Structure of Mouse Protocadherin-15 EC4-7
Descriptor: CALCIUM ION, POTASSIUM ION, Protocadherin-15
Authors:Klanseck, C.F, Neel, B.L, Sotomayor, M.
Deposit date:2017-06-02
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 2020
6N2E
DownloadVisualize
BU of 6n2e by Molmil
Crystal Structure of Human Protocadherin-15 EC1-3 G16D N369D Q370N and Mouse Cadherin-23 EC1-2 T15E
Descriptor: CALCIUM ION, Cadherin-23, Protocadherin-15
Authors:Choudhary, D, De-la-Torre, P, Sotomayor, M.
Deposit date:2018-11-12
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 117, 2020
6N22
DownloadVisualize
BU of 6n22 by Molmil
Crystal structure of mouse Protocadherin-15 EC1-2 BAP
Descriptor: CALCIUM ION, Protocadherin-15
Authors:Narui, Y, Sotomayor, M.
Deposit date:2018-11-12
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 117, 2020
5W4T
DownloadVisualize
BU of 5w4t by Molmil
Crystal Structure of Fish Cadherin-23 EC1-3
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:De-la-Torre, P, Sotomayor, M.
Deposit date:2017-06-12
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
5VVM
DownloadVisualize
BU of 5vvm by Molmil
Crystal structure of human CDH23 EC21-23
Descriptor: CALCIUM ION, Cadherin-23
Authors:Patel, A, Jaiganesh, A, Sotomayor, M.
Deposit date:2017-05-19
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.54 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
5VT8
DownloadVisualize
BU of 5vt8 by Molmil
Crystal Structure of Mouse Cadherin-23 EC24-25
Descriptor: CALCIUM ION, Cadherin-23
Authors:Jaiganesh, A, Sotomayor, M.
Deposit date:2017-05-15
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
5WJR
DownloadVisualize
BU of 5wjr by Molmil
High resolution native hexamer DNA and RNA hybrid in complex with RNase H catalytic domain D132N mutant
Descriptor: DNA (5'-D(*AP*TP*GP*TP*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
Authors:Fang, Z, Huang, Z.
Deposit date:2017-07-24
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5X35
DownloadVisualize
BU of 5x35 by Molmil
Solution structure of the Family 1 carbohydrate-binding module with mannosylated Thr1
Descriptor: Exoglucanase 1, alpha-D-mannopyranose
Authors:Feng, Y, Tan, Z.
Deposit date:2017-02-04
Release date:2017-05-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Insight into the Stabilizing Effect of O-Glycosylation
Biochemistry, 56, 2017
5X38
DownloadVisualize
BU of 5x38 by Molmil
Solution structure of the Family 1 carbohydrate-binding module with glucosylated Ser3
Descriptor: Exoglucanase 1, beta-D-glucopyranose
Authors:Feng, Y, Tan, Z.
Deposit date:2017-02-04
Release date:2017-05-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Insight into the Stabilizing Effect of O-Glycosylation
Biochemistry, 56, 2017
5X36
DownloadVisualize
BU of 5x36 by Molmil
Solution structure of the Family 1 carbohydrate-binding module with mannosylated Ser3
Descriptor: Exoglucanase 1, alpha-D-mannopyranose
Authors:Feng, Y, Tan, Z.
Deposit date:2017-02-04
Release date:2017-05-31
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structural Insight into the Stabilizing Effect of O-Glycosylation
Biochemistry, 56, 2017
5X3C
DownloadVisualize
BU of 5x3c by Molmil
Solution structure of the Family 1 carbohydrate-binding module Y5A mutant with mannosylated Ser3
Descriptor: Exoglucanase 1, alpha-D-mannopyranose
Authors:Feng, Y, Tan, Z.
Deposit date:2017-02-04
Release date:2017-05-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Insight into the Stabilizing Effect of O-Glycosylation
Biochemistry, 56, 2017
5X37
DownloadVisualize
BU of 5x37 by Molmil
Solution structure of the Family 1 carbohydrate-binding module with mannosylated Ser14
Descriptor: Exoglucanase 1, alpha-D-mannopyranose
Authors:Feng, Y, Tan, Z.
Deposit date:2017-02-04
Release date:2017-05-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Insight into the Stabilizing Effect of O-Glycosylation
Biochemistry, 56, 2017
3K5J
DownloadVisualize
BU of 3k5j by Molmil
Crystal structure of Putative SUFU (suppressor of fused protein) homolog (YP_208451.1) from Neisseria gonorrhoeae FA 1090 at 1.40 A resolution
Descriptor: GLYCEROL, SULFATE ION, Suppressor of fused family protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-10-07
Release date:2010-01-26
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu.
Protein Sci., 19, 2010
3HSA
DownloadVisualize
BU of 3hsa by Molmil
Crystal structure of pleckstrin homology domain (YP_926556.1) from SHEWANELLA AMAZONENSIS SB2B at 1.99 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, pleckstrin homology domain
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-10
Release date:2009-06-23
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain.
J.Mol.Biol., 396, 2010
3KK7
DownloadVisualize
BU of 3kk7 by Molmil
Crystal structure of Putative cell invasion protein with MAC/Perforin domain (NP_812351.1) from BACTERIODES THETAIOTAOMICRON VPI-5482 at 2.46 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-11-04
Release date:2009-11-24
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron.
Acta Crystallogr.,Sect.F, 66, 2010
6NW9
DownloadVisualize
BU of 6nw9 by Molmil
CRYSTAL STRUCTURE OF A TAILSPIKE PROTEIN 3 (TSP3, ORF212) FROM ESCHERICHIA COLI O157:H7 BACTERIOPHAGE CBA120
Descriptor: 1,2-ETHANEDIOL, CARBONATE ION, CHLORIDE ION, ...
Authors:Greenfield, J.Y, Herzberg, O.
Deposit date:2019-02-06
Release date:2019-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and tailspike glycosidase machinery of ORF212 from E. coli O157:H7 phage CBA120 (TSP3).
Sci Rep, 9, 2019
8RIY
DownloadVisualize
BU of 8riy by Molmil
Human NUDT5 with ibrutinib derivative
Descriptor: 1-(1-methylpiperidin-4-yl)-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-4-amine, ADP-sugar pyrophosphatase
Authors:Balikci-Akil, E, Elkins, J.M, Huber, K.V.M.
Deposit date:2023-12-19
Release date:2024-05-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.288 Å)
Cite:Unexpected Noncovalent Off-Target Activity of Clinical BTK Inhibitors Leads to Discovery of a Dual NUDT5/14 Antagonist.
J.Med.Chem., 67, 2024
8RDZ
DownloadVisualize
BU of 8rdz by Molmil
Crystal Structure of Human ADP-ribose Pyrophosphatase NUDT5 In complex with Ibrutinib
Descriptor: 1,2-ETHANEDIOL, ADP-sugar pyrophosphatase, Ibrutinib (unbound form), ...
Authors:Raux, B, Huber, K.V.M.
Deposit date:2023-12-09
Release date:2024-05-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Unexpected Noncovalent Off-Target Activity of Clinical BTK Inhibitors Leads to Discovery of a Dual NUDT5/14 Antagonist.
J.Med.Chem., 67, 2024

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon