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1J3A
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BU of 1j3a by Molmil
Crystal structure of ribosomal protein L13 from Pyrococcus horikoshii
Descriptor: 50S ribosomal protein L13P
Authors:Nakashima, T, Tanaka, M, Kazama, T, Kawamura, S, Kimura, M, Yao, M, Tanaka, I.
Deposit date:2003-01-21
Release date:2003-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of ribosomal protein L13 from hyperthermophilic archaeon Pyrococcus horikoshii
To be Published
2X79
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BU of 2x79 by Molmil
Inward facing conformation of Mhp1
Descriptor: HYDANTOIN TRANSPORT PROTEIN
Authors:Shimamura, T, Weyand, S, Beckstein, O, Rutherford, N.G, Hadden, J.M, Sharples, D, Sansom, M.S.P, Iwata, S, Henderson, P.J.F, Cameron, A.D.
Deposit date:2010-02-25
Release date:2010-05-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Molecular Basis of Alternating Access Membrane Transport by the Sodium-Hydantoin Transporter Mhp1.
Science, 328, 2010
2YRC
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BU of 2yrc by Molmil
Solution structure of the zf-Sec23_Sec24 from human Sec23A
Descriptor: Protein transport protein Sec23A, ZINC ION
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the zf-Sec23_Sec24 from human Sec23A
To be Published
2YRB
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BU of 2yrb by Molmil
Solution structure of the first C2 domain from human KIAA1005 protein
Descriptor: Protein fantom
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first C2 domain from human KIAA1005 protein
To be Published
1WGY
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BU of 1wgy by Molmil
RA domain of guanine nucleotide exchange factor for Rap1
Descriptor: Rap guanine nucleotide exchange factor 5
Authors:Nagashima, T, Tochio, N, Kigawa, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:RA domain of guanine nucleotide exchange factor for Rap1
TO BE PUBLISHED
2Z6O
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BU of 2z6o by Molmil
Crystal Structure of the Ufc1, Ufm1 conjugating enzyme 1
Descriptor: MAGNESIUM ION, Ufm1-conjugating enzyme 1
Authors:Mizushima , T, Tatsumi, K, Ozaki, Y, Kawakami, T, Suzuki, A, Ogasahara, K, Komatsu, M, Kominami, E, Tanaka, K, Yamane, T.
Deposit date:2007-08-06
Release date:2007-09-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Ufc1, the Ufm1-conjugating enzyme
Biochem.Biophys.Res.Commun., 362, 2007
2Z6P
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BU of 2z6p by Molmil
Crystal Structure of the Ufc1, Ufm1 conjugating enzyme 1
Descriptor: Ufm1-conjugating enzyme 1
Authors:Mizushima , T, Tatsumi, K, Ozaki, Y, Kawakami, T, Suzuki, A, Ogasahara, K, Komatsu, M, Kominami, E, Tanaka, K, Yamane, T.
Deposit date:2007-08-06
Release date:2007-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Ufc1, the Ufm1-conjugating enzyme
Biochem.Biophys.Res.Commun., 362, 2007
1V27
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BU of 1v27 by Molmil
Solution structure of the first C2 domain of RIM2
Descriptor: Regulating synaptic membrane exocytosis protein 2
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-07
Release date:2004-04-07
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the first C2 domain of RIM2
to be published
1V9X
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BU of 1v9x by Molmil
Solution structure of the first Zn-finger domain of poly(ADP-ribose) polymerase-1
Descriptor: ZINC ION, poly (ADP-ribose) polymerase
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-02-04
Release date:2005-02-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the first Zn-finger domain of poly(ADP-ribose) polymerase-1
To be Published
1IQ4
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BU of 1iq4 by Molmil
5S-RRNA BINDING RIBOSOMAL PROTEIN L5 FROM BACILLUS STEAROTHERMOPHILUS
Descriptor: 50S RIBOSOMAL PROTEIN L5
Authors:Nakashima, T, Yao, M, Kawamura, S, Iwasaki, K, Kimura, M, Tanaka, I.
Deposit date:2001-06-13
Release date:2001-06-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ribosomal protein L5 has a highly twisted concave surface and flexible arms responsible for rRNA binding.
RNA, 7, 2001
2ZQ8
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BU of 2zq8 by Molmil
Apo structure of class a beta-lactamase Toho-1 R274N/R276N double mutant
Descriptor: Beta-lactamase Toho-1, SULFATE ION
Authors:Shimamura, T, Nitanai, Y, Uchiyama, T, Ago, H, Matsuzawa, H, Miyano, M.
Deposit date:2008-08-07
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Improvement of crystal quality by surface mutations of beta-lactamase Toho-1
Acta Crystallogr.,Sect.F, 65, 2009
2ZQ7
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BU of 2zq7 by Molmil
Apo structure of Class A beta-lactamase Toho-1 E166A/R274N/R276N triple mutant
Descriptor: Beta-lactamase Toho-1, SULFATE ION
Authors:Shimamura, T, Nitanai, Y, Uchiyama, T, Ago, H, Matsuzawa, H, Miyano, M.
Deposit date:2008-08-07
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Improvement of the Crystal Quality by the Surface Mutations on a Beta-Lactamase Toho-1
To be Published
1WFO
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BU of 1wfo by Molmil
The eighth FN3 domain of human sidekick-2
Descriptor: sidekick 2
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2005-06-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The eighth FN3 domain of human sidekick-2
TO BE PUBLISHED
1WFJ
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BU of 1wfj by Molmil
C2 domain-containing protein from putative elicitor-responsive gene
Descriptor: putative elicitor-responsive gene
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:C2 domain-containing protein from putative elicitor-responsive gene
TO BE PUBLISHED
1WFM
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BU of 1wfm by Molmil
The first C2 domain of human synaptotagmin XIII
Descriptor: synaptotagmin XIII
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The first C2 domain of human synaptotagmin XIII
TO BE PUBLISHED
1WFK
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BU of 1wfk by Molmil
FYVE domain of FYVE domain containing 19 protein from Mus musculus
Descriptor: ZINC ION, zinc finger, FYVE domain containing 19
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:FYVE domain of FYVE domain containing 19 protein from Mus musculus
TO BE PUBLISHED
1WF6
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BU of 1wf6 by Molmil
The third BRCA1 C-terminus (BRCT) domain of Similar to S.pombe rad4+/cut5+ product
Descriptor: Similar to S.pombe -rad4+/cut5+product (A40727)
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The third BRCA1 C-terminus (BRCT) domain of Similar to S.pombe rad4+/cut5+ product
TO BE PUBLISHED
1WFI
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BU of 1wfi by Molmil
Nuclear move domain of nuclear distribution gene C homolog
Descriptor: nuclear distribution gene C homolog
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Nuclear move domain of nuclear distribution gene C homolog
TO BE PUBLISHED
1WFG
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BU of 1wfg by Molmil
PDZ domain of human RIM2B
Descriptor: Regulating synaptic membrane exocytosis protein 2
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:PDZ domain of human RIM2B
TO BE PUBLISHED
1WFN
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BU of 1wfn by Molmil
The fourth FN3 domain of human sidekick-2
Descriptor: sidekick 2
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2005-06-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The fourth FN3 domain of human sidekick-2
TO BE PUBLISHED
3AY4
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BU of 3ay4 by Molmil
Crystal structure of nonfucosylated Fc complexed with bis-glycosylated soluble form of Fc gamma receptor IIIa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, Low affinity immunoglobulin gamma Fc region receptor III-A, ...
Authors:Mizushima, T, Takemoto, E, Yagi, H, Shibata-Koyama, M, Isoda, Y, Iida, S, Satoh, M, Kato, K.
Deposit date:2011-04-28
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for improved efficacy of therapeutic antibodies on defucosylation of their Fc glycans
Genes Cells, 16, 2011
2CS4
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BU of 2cs4 by Molmil
Solution structure of N-terminal domain of chromosome 12 open reading frame 2
Descriptor: Protein C12orf2
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of N-terminal domain of chromosome 12 open reading frame 2
To be Published
2CRQ
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BU of 2crq by Molmil
Solution structure of C-terminal domain of RIKEN cDNA 2810012L14
Descriptor: mitochondrial translational initiation factor 3
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of C-terminal domain of RIKEN cDNA 2810012L14
To be published
2CR0
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BU of 2cr0 by Molmil
Solution structure of nuclear move domain of nuclear distribution gene C
Descriptor: Nuclear migration protein nudC
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of nuclear move domain of nuclear distribution gene C
To be Published
2CR2
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BU of 2cr2 by Molmil
Solution structure of N-terminal domain of speckle-type POZ protein
Descriptor: Speckle-type POZ protein
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of N-terminal domain of speckle-type POZ protein
To be Published

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