1PZ7
| Modulation of agrin function by alternative splicing and Ca2+ binding | Descriptor: | Agrin, CALCIUM ION | Authors: | Stetefeld, J, Alexandrescu, A.T, Maciejewski, M.W, Jenny, M, Rathgeb-Szabo, K, Schulthess, T, Landwehr, R, Frank, S, Ruegg, M.A, Kammerer, R.A. | Deposit date: | 2003-07-10 | Release date: | 2004-04-13 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.421 Å) | Cite: | Modulation of agrin function by alternative splicing and Ca2+ binding. STRUCTURE, 12, 2004
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3I70
| Long-wavelength structure of NtA | Descriptor: | Agrin | Authors: | Stetefeld, J. | Deposit date: | 2009-07-07 | Release date: | 2010-03-02 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | An interdomain disulfide bridge links the NtA and first FS domain in agrin. Protein Sci., 18, 2009
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1YBK
| RHCC cocrystallized with CAPB | Descriptor: | N-(CARBOXYMETHYL)-N,N-DIMETHYL-3-[(1-OXODODECYL)AMINO]-1-PROPANAMINIUM INNER SALT, SULFATE ION, tetrabrachion | Authors: | Stetefeld, J. | Deposit date: | 2004-12-21 | Release date: | 2005-01-18 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Favourable mediation of crystal contacts by cocoamidopropylbetaine (CAPB). Acta Crystallogr.,Sect.D, 61, 2005
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3FQA
| Gabaculien complex of gabaculine resistant GSAM version | Descriptor: | 3-AMINOBENZOIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Glutamate-1-semialdehyde 2,1-aminomutase | Authors: | Stetefeld, J. | Deposit date: | 2009-01-07 | Release date: | 2009-11-24 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Absence of a catalytic water confers resistance to the neurotoxin gabaculine. Faseb J., 24, 2010
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3FQ8
| M248I mutant of GSAM | Descriptor: | 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Glutamate-1-semialdehyde 2,1-aminomutase | Authors: | Stetefeld, J. | Deposit date: | 2009-01-07 | Release date: | 2009-11-24 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Absence of a catalytic water confers resistance to the neurotoxin gabaculine. Faseb J., 24, 2010
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3FQ7
| Gabaculine complex of GSAM | Descriptor: | 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID, Glutamate-1-semialdehyde 2,1-aminomutase | Authors: | Stetefeld, J. | Deposit date: | 2009-01-07 | Release date: | 2009-11-24 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Absence of a catalytic water confers resistance to the neurotoxin gabaculine. Faseb J., 24, 2010
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3GPR
| Crystal structure of rhodocetin | Descriptor: | Rhodocetin subunit alpha, Rhodocetin subunit beta, Rhodocetin subunit delta, ... | Authors: | Stetefeld, J. | Deposit date: | 2009-03-23 | Release date: | 2009-12-15 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | The alpha2beta1 integrin-specific antagonist rhodocetin is a cruciform, heterotetrameric molecule Faseb J., 23, 2009
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1PXU
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1MZ9
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3V2P
| COMPcc in complex with fatty acids | Descriptor: | Cartilage Oligomerization matrix protein (coiled-coil domain), STEARIC ACID | Authors: | Stetefeld, J. | Deposit date: | 2011-12-12 | Release date: | 2013-01-16 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.873 Å) | Cite: | The pentameric channel of COMPcc in complex with different fatty acids. Plos One, 7, 2012
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3V2N
| COMPcc in complex with fatty acids | Descriptor: | Cartilage Oligomerization matrix protein (coiled-coil domain), MYRISTIC ACID | Authors: | Stetefeld, J. | Deposit date: | 2011-12-12 | Release date: | 2013-01-16 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The pentameric channel of COMPcc in complex with different fatty acids. Plos One, 7, 2012
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3V2Q
| COMPcc in complex with fatty acids | Descriptor: | Cartilage Oligomerization matrix protein (coiled-coil domain), PALMITIC ACID | Authors: | Stetefeld, J. | Deposit date: | 2011-12-12 | Release date: | 2013-01-16 | Last modified: | 2013-03-20 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | The pentameric channel of COMPcc in complex with different fatty acids. Plos One, 7, 2012
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7MX9
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9D77
| Crystal form of Netrin-1 mimics nanotubes | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | Authors: | Meier, M, Krahn, N.J, McDougall, M.D, Rafiei, F, Koch, M, Stetefeld, J. | Deposit date: | 2024-08-16 | Release date: | 2024-10-09 | Method: | X-RAY DIFFRACTION (3.4 Å) | Cite: | Mechanistic insights in the higher-order protein assemblies of netrin-1 To Be Published
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7R6H
| RHCC in complex with o-carborane | Descriptor: | Tetrabrachion, ortho-carborane | Authors: | Heide, F, McDougall, M, Stetefeld, J. | Deposit date: | 2021-06-22 | Release date: | 2021-07-07 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Boron rich nanotube drug carrier system is suited for boron neutron capture therapy. Sci Rep, 11, 2021
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4WNX
| Netrin 4 lacking the C-terminal Domain | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | Authors: | McDougall, M, Patel, T, Reuten, R, Meier, M, Koch, M, Stetefeld, J. | Deposit date: | 2014-10-14 | Release date: | 2016-02-10 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2.723 Å) | Cite: | Structural decoding of netrin-4 reveals a regulatory function towards mature basement membranes. Nat Commun, 7, 2016
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2VZ4
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5UA3
| Crystal Structure of a DNA G-Quadruplex with a Cytosine Bulge | Descriptor: | DNA (5'-D(*GP*GP*GP*TP*TP*GP*CP*GP*GP*AP*GP*GP*GP*TP*GP*GP*GP*CP*CP*T)-3'), POTASSIUM ION | Authors: | Meier, M, McDougall, M.D, Krahn, N.J, Moya-Torres, A, McRae, E.K.S, Booy, E.P, Patel, T.R, McKenna, S.A, Stetefeld, J. | Deposit date: | 2016-12-18 | Release date: | 2017-11-22 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.8802 Å) | Cite: | Structure and hydrodynamics of a DNA G-quadruplex with a cytosine bulge. Nucleic Acids Res., 46, 2018
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6BRI
| RHCC with unreduced and reduced Mercury complexes | Descriptor: | GLYCEROL, IODIDE ION, MERCURY (II) IODIDE, ... | Authors: | McDougall, M, Trieu, B, Stetefeld, J. | Deposit date: | 2017-11-30 | Release date: | 2018-02-07 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (3.266 Å) | Cite: | Reductive power of the archaea right-handed coiled coil nanotube (RHCC-NT) and incorporation of mercury clusters inside protein cages. J. Struct. Biol., 203, 2018
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5JR5
| RHCC in Complex with Elemental Sulfur | Descriptor: | SULFATE ION, Tetrabrachion, octathiocane | Authors: | McDougall, M, Meier, M, Stetefeld, J. | Deposit date: | 2016-05-05 | Release date: | 2017-05-10 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Archaea S-layer nanotube from a "black smoker" in complex with cyclo-octasulfur (S8 ) rings. Proteins, 85, 2017
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5VKF
| RHCC in complex with Naphthalene | Descriptor: | NAPHTHALENE, SULFATE ION, Tetrabrachion | Authors: | McDougall, M, Stetefeld, J. | Deposit date: | 2017-04-21 | Release date: | 2018-04-25 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.752 Å) | Cite: | Proteinaceous Nano container Encapsulate Polycyclic Aromatic Hydrocarbons. Sci Rep, 9, 2019
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4OVE
| X-ray Crystal Structure of Mouse Netrin-1 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | Authors: | Meier, M, Nikodemus, D, Reuten, R, Patel, T.R, Orriss, G, Okun, N, Koch, M, Stetefeld, J. | Deposit date: | 2014-02-21 | Release date: | 2015-02-25 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2.64 Å) | Cite: | Structural Decoding of the Netrin-1/UNC5 Interaction and its Therapeutical Implications in Cancers. Cancer Cell, 29, 2016
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8SNP
| Crystal structure of mouse Netrin-1 in complex with samarium ions | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Heide, F, Legare, S, Stetefeld, J. | Deposit date: | 2023-04-27 | Release date: | 2024-02-07 | Method: | X-RAY DIFFRACTION (3.4 Å) | Cite: | Investigating the structural and functional roles of calcium binding in Netrin-1 To Be Published
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8TSM
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7LRF
| Netrin-1 in complex with SOS | Descriptor: | 1,2-ETHANEDIOL, 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ... | Authors: | Gupta, M, McDougall, M, Torres, A.M, Stetefeld, J. | Deposit date: | 2021-02-16 | Release date: | 2022-02-23 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (3.21 Å) | Cite: | The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation. Nat Commun, 14, 2023
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