Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4GDA
DownloadVisualize
BU of 4gda by Molmil
Circular Permuted Streptavidin A50/N49
Descriptor: BIOTIN, ETHANOL, GLYCEROL, ...
Authors:Le Trong, I, Chu, V, Xing, Y, Lybrand, T.P, Stayton, P.S, Stenkamp, R.E.
Deposit date:2012-07-31
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural consequences of cutting a binding loop: two circularly permuted variants of streptavidin.
Acta Crystallogr.,Sect.D, 69, 2013
2FIB
DownloadVisualize
BU of 2fib by Molmil
RECOMBINANT HUMAN GAMMA-FIBRINOGEN CARBOXYL TERMINAL FRAGMENT (RESIDUES 143-411) COMPLEXED TO THE PEPTIDE GLY-PRO-ARG-PRO AT PH 6.0
Descriptor: CALCIUM ION, FIBRINOGEN, GLY-PRO-ARG-PRO
Authors:Pratt, K.P, Cote, H.C.F, Chung, D.W, Stenkamp, R.E, Davie, E.W.
Deposit date:1997-06-03
Release date:1997-10-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The primary fibrin polymerization pocket: three-dimensional structure of a 30-kDa C-terminal gamma chain fragment complexed with the peptide Gly-Pro-Arg-Pro.
Proc.Natl.Acad.Sci.USA, 94, 1997
2GH7
DownloadVisualize
BU of 2gh7 by Molmil
Epi-biotin complex with core streptavidin
Descriptor: BIOTIN, EPI-BIOTIN, GLYCEROL, ...
Authors:Le Trong, I, Aubert, D.G.L, Thomas, N.R, Stenkamp, R.E.
Deposit date:2006-03-26
Release date:2006-04-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1 Å)
Cite:The high-resolution structure of (+)-epi-biotin bound to streptavidin.
Acta Crystallogr.,Sect.D, 62, 2006
2F01
DownloadVisualize
BU of 2f01 by Molmil
Epi-biotin complex with core streptavidin
Descriptor: BIOTIN, EPI-BIOTIN, GLYCEROL, ...
Authors:Le Trong, I, Aubert, D.G, Thomas, N.R, Stenkamp, R.E.
Deposit date:2005-11-10
Release date:2005-11-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:The high-resolution structure of (+)-epi-biotin bound to streptavidin.
Acta Crystallogr.,Sect.D, 62, 2006
4PNF
DownloadVisualize
BU of 4pnf by Molmil
Glutathione S-Transferase from Drosophila melanogaster - isozyme E6
Descriptor: GLUTATHIONE, RE21095p
Authors:Scian, M, Le Trong, I, Mannervik, B, Atkins, W.M, Stenkamp, R.E.
Deposit date:2014-05-23
Release date:2015-05-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Comparison of epsilon- and delta-class glutathione S-transferases: the crystal structures of the glutathione S-transferases DmGSTE6 and DmGSTE7 from Drosophila melanogaster.
Acta Crystallogr.,Sect.D, 71, 2015
4PNG
DownloadVisualize
BU of 4png by Molmil
Glutathione S-transferase from Drosophila melanogaster - isozyme E7
Descriptor: L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE, LD04004p
Authors:Scian, M, Le Trong, I, Mannervik, B, Atkins, W.M, Stenkamp, R.E.
Deposit date:2014-05-23
Release date:2015-05-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Comparison of epsilon- and delta-class glutathione S-transferases: the crystal structures of the glutathione S-transferases DmGSTE6 and DmGSTE7 from Drosophila melanogaster.
Acta Crystallogr.,Sect.D, 71, 2015
1HMD
DownloadVisualize
BU of 1hmd by Molmil
THE STRUCTURE OF DEOXY AND OXY HEMERYTHRIN AT 2.0 ANGSTROMS RESOLUTION
Descriptor: ACETYL GROUP, HEMERYTHRIN, MU-OXO-DIIRON
Authors:Holmes, M.A, Letrong, I, Turley, S, Sieker, L.C, Stenkamp, R.E.
Deposit date:1990-10-18
Release date:1992-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of deoxy and oxy hemerythrin at 2.0 A resolution.
J.Mol.Biol., 218, 1991
1HMO
DownloadVisualize
BU of 1hmo by Molmil
THE STRUCTURE OF DEOXY AND OXY HEMERYTHRIN AT 2.0 ANGSTROMS RESOLUTION
Descriptor: ACETYL GROUP, HEMERYTHRIN, MU-OXO-DIIRON, ...
Authors:Holmes, M.A, Letrong, I, Turley, S, Sieker, L.C, Stenkamp, R.E.
Deposit date:1990-10-18
Release date:1992-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of deoxy and oxy hemerythrin at 2.0 A resolution.
J.Mol.Biol., 218, 1991
1DF8
DownloadVisualize
BU of 1df8 by Molmil
S45A MUTANT OF STREPTAVIDIN IN COMPLEX WITH BIOTIN
Descriptor: BIOTIN, PROTEIN (STREPTAVIDIN)
Authors:Hyre, D.E, Le Trong, I, Freitag, S, Stenkamp, R.E, Stayton, P.S.
Deposit date:1999-11-18
Release date:2000-09-20
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Ser45 plays an important role in managing both the equilibrium and transition state energetics of the streptavidin-biotin system.
Protein Sci., 9, 2000
1DVB
DownloadVisualize
BU of 1dvb by Molmil
RUBRERYTHRIN
Descriptor: FE (III) ION, RUBRERYTHRIN, ZINC ION
Authors:Sieker, L.C, Holmes, M, Le Trong, I, Turley, S, Liu, M.Y, Legall, J, Stenkamp, R.E.
Deposit date:2000-01-20
Release date:2000-11-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 1.9 A crystal structure of the "as isolated" rubrerythrin from Desulfovibrio vulgaris: some surprising results.
J.Biol.Inorg.Chem., 5, 2000
3RQ9
DownloadVisualize
BU of 3rq9 by Molmil
Structure of Tsi2, a Tse2-immunity protein from Pseudomonas aeruginosa
Descriptor: Type VI secretion immunity protein
Authors:Li, M, Le Trong, I, Stenkamp, R.E, Mougous, J.D.
Deposit date:2011-04-27
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis for Type VI Secretion Effector Recognition by a Cognate Immunity Protein.
Plos Pathog., 8, 2012
3T6F
DownloadVisualize
BU of 3t6f by Molmil
Biotin complex of Y54F core streptavidin
Descriptor: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
Authors:Baugh, L, Le Trong, I, Cerutti, D.S, Mehta, N, Gulich, S, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
Deposit date:2011-07-28
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3T6L
DownloadVisualize
BU of 3t6l by Molmil
Y54F mutant of core streptavidin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Streptavidin
Authors:Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
Deposit date:2011-07-28
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3BWY
DownloadVisualize
BU of 3bwy by Molmil
Crystal Structure of Human 108M Catechol O-methyltransferase bound with S-adenosylmethionine and inhibitor dinitrocatechol
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3,5-DINITROCATECHOL, COMT protein, ...
Authors:Rutherford, K, Le Trong, I, Stenkamp, R.E, Parson, W.W.
Deposit date:2008-01-10
Release date:2008-06-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structures of human 108V and 108M catechol O-methyltransferase.
J.Mol.Biol., 380, 2008
3BWM
DownloadVisualize
BU of 3bwm by Molmil
Crystal Structure of Human Catechol O-Methyltransferase with bound SAM and DNC
Descriptor: 3,5-DINITROCATECHOL, Catechol O-methyltransferase, MAGNESIUM ION, ...
Authors:Rutherford, K, Le Trong, I, Stenkamp, R.E, Parson, W.W.
Deposit date:2008-01-09
Release date:2008-06-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structures of human 108V and 108M catechol O-methyltransferase.
J.Mol.Biol., 380, 2008
2QSQ
DownloadVisualize
BU of 2qsq by Molmil
Crystal structure of the N-terminal domain of carcinoembryonic antigen (CEA)
Descriptor: CHLORIDE ION, Carcinoembryonic antigen-related cell adhesion molecule 5, GLYCEROL
Authors:Le Trong, I, Korotkova, N, Moseley, S.L, Stenkamp, R.E.
Deposit date:2007-07-31
Release date:2008-01-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Binding of Dr adhesins of Escherichia coli to carcinoembryonic antigen triggers receptor dissociation.
Mol.Microbiol., 67, 2008
1BFA
DownloadVisualize
BU of 1bfa by Molmil
RECOMBINANT BIFUNCTIONAL HAGEMAN FACTOR/AMYLASE INHIBITOR FROM MAIZE
Descriptor: BIFUNCTIONAL AMYLASE/SERINE PROTEASE INHIBITOR
Authors:Behnke, C.A, Yee, V.C, Le Trong, I, Pedersen, L.C, Stenkamp, R.E, Kim, S.S, Reeck, G.R, Teller, D.C.
Deposit date:1998-05-13
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural determinants of the bifunctional corn Hageman factor inhibitor: x-ray crystal structure at 1.95 A resolution.
Biochemistry, 37, 1998
1B71
DownloadVisualize
BU of 1b71 by Molmil
RUBRERYTHRIN
Descriptor: FE (III) ION, PROTEIN (RUBRERYTHRIN), ZINC ION
Authors:Sieker, L.C, Holmes, M, Le Trong, I, Turley, S, Santarsiero, B.D, Liu, M.-Y, Legall, J, Stenkamp, R.E.
Deposit date:1999-01-26
Release date:2000-01-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Alternative metal-binding sites in rubrerythrin.
Nat.Struct.Biol., 6, 1999
1BEA
DownloadVisualize
BU of 1bea by Molmil
BIFUNCTIONAL HAGEMAN FACTOR/AMYLASE INHIBITOR FROM MAIZE
Descriptor: BIFUNCTIONAL AMYLASE/SERINE PROTEASE INHIBITOR
Authors:Behnke, C.A, Yee, V.C, Le Trong, I, Pedersen, L.C, Stenkamp, R.E, Kim, S.S, Reeck, G.R, Teller, D.C.
Deposit date:1998-05-13
Release date:1998-08-12
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural determinants of the bifunctional corn Hageman factor inhibitor: x-ray crystal structure at 1.95 A resolution.
Biochemistry, 37, 1998
2QCB
DownloadVisualize
BU of 2qcb by Molmil
T7-tagged full-length streptavidin complexed with ruthenium ligand
Descriptor: N-(4-{[(2-AMINOETHYL)AMINO]SULFONYL}PHENYL)-5-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANAMIDE-(1,2,3,4,5,6-ETA)-BENZENE-CHLORO-RUTHENIUM(III), Streptavidin
Authors:Le Trong, I, Creus, M, Pordea, A, Ward, T.R, Stenkamp, R.E.
Deposit date:2007-06-19
Release date:2008-04-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray structure and designed evolution of an artificial transfer hydrogenase
Angew.Chem.Int.Ed.Engl., 47, 2008
2QST
DownloadVisualize
BU of 2qst by Molmil
Crystal structure of the V39C mutant of the N-terminal domain of carcinoembryonic antigen (CEA)
Descriptor: Carcinoembryonic antigen-related cell adhesion molecule 5
Authors:Le Trong, I, Korotkova, N, Moseley, S.L, Stenkamp, R.E.
Deposit date:2007-07-31
Release date:2008-01-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Binding of Dr adhesins of Escherichia coli to carcinoembryonic antigen triggers receptor dissociation.
Mol.Microbiol., 67, 2008
3UC7
DownloadVisualize
BU of 3uc7 by Molmil
Trp-cage cyclo-TC1 - monoclinic crystal form
Descriptor: CHLORIDE ION, Cyclo-TC1
Authors:Scian, M, Le Trong, I, Stenkamp, R.E, Andersen, N.H.
Deposit date:2011-10-26
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal and NMR structures of a Trp-cage mini-protein benchmark for computational fold prediction.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UC8
DownloadVisualize
BU of 3uc8 by Molmil
Trp-cage cyclo-TC1 - tetragonal crystal form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, cyclo-TC1
Authors:Scian, M, Le Trong, I, Stenkamp, R.E, Andersen, N.H.
Deposit date:2011-10-26
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Crystal and NMR structures of a Trp-cage mini-protein benchmark for computational fold prediction.
Proc.Natl.Acad.Sci.USA, 109, 2012
3IK9
DownloadVisualize
BU of 3ik9 by Molmil
Human GST A1-1-GIMF with GSDHN
Descriptor: (S)-2-amino-5-((R)-1-(carboxymethylamino)-3-((3S,4R)-1,4-dihydroxynonan-3-ylthio)-1-oxopropan-2-ylamino)-5-oxopentanoic acid, Glutathione S-transferase A1
Authors:Balogh, L.M, Le Trong, I, Atkins, W.M, Stenkamp, R.E.
Deposit date:2009-08-05
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate specificity combined with stereopromiscuity in glutathione transferase A4-4-dependent metabolism of 4-hydroxynonenal.
Biochemistry, 49, 2010
2I37
DownloadVisualize
BU of 2i37 by Molmil
Crystal structure of a photoactivated rhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Rhodopsin, ...
Authors:Lodowski, D.T, Stenkamp, R.E, Salom, D, Le Trong, I, Palczewski, K.
Deposit date:2006-08-17
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (4.15 Å)
Cite:Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.
Proc.Natl.Acad.Sci.Usa, 103, 2006

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon