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4EH9
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BU of 4eh9 by Molmil
Human p38 MAP kinase in complex with NP-F11 and RL87
Descriptor: (1R,5S)-3-[4-(trifluoromethyl)benzoyl]-1,2,3,4,5,6-hexahydro-8H-1,5-methanopyrido[1,2-a][1,5]diazocin-8-one, Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine
Authors:Over, B, Gruetter, C, Waldmann, H, Rauh, D.
Deposit date:2012-04-02
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Natural-product-derived fragments for fragment-based ligand discovery.
Nat Chem, 5, 2012
4EHV
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BU of 4ehv by Molmil
Human p38 MAP kinase in complex with NP-F10 and RL87
Descriptor: (1R,5S)-3-(4-chlorobenzoyl)-1,2,3,4,5,6-hexahydro-8H-1,5-methanopyrido[1,2-a][1,5]diazocin-8-one, Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine
Authors:Over, B, Gruetter, C, Waldmann, H, Rauh, D.
Deposit date:2012-04-04
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Natural-product-derived fragments for fragment-based ligand discovery.
Nat Chem, 5, 2012
4EH8
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BU of 4eh8 by Molmil
Human p38 MAP kinase in complex with NP-F7 and RL87
Descriptor: Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine, [3-(benzyloxy)phenyl]methanol
Authors:Over, B, Gruetter, C, Waldmann, H, Rauh, D.
Deposit date:2012-04-02
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Natural-product-derived fragments for fragment-based ligand discovery.
Nat Chem, 5, 2012
4EH4
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BU of 4eh4 by Molmil
Human p38 MAP kinase in complex with NP-F3 and RL87
Descriptor: Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine, phenyl(piperidin-1-yl)methanone
Authors:Over, B, Gruetter, C, Waldmann, H, Rauh, D.
Deposit date:2012-04-02
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Natural-product-derived fragments for fragment-based ligand discovery.
Nat Chem, 5, 2012
4EV6
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BU of 4ev6 by Molmil
The complete structure of CorA magnesium transporter from Methanocaldococcus jannaschii
Descriptor: MAGNESIUM ION, Magnesium transport protein CorA, UNDECYL-MALTOSIDE
Authors:Guskov, A, Nordin, N, Reynaud, A, Engman, H, Lundback, A.-K, Jong, A.J.O, Cornvik, T, Phua, T, Eshaghi, S.
Deposit date:2012-04-25
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into the mechanisms of Mg2+ uptake, transport, and gating by CorA
Proc.Natl.Acad.Sci.USA, 109, 2012
4EHM
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BU of 4ehm by Molmil
RabGGTase in complex with covalently bound Psoromic acid
Descriptor: 4-formyl-3-hydroxy-8-methoxy-1,9-dimethyl-11-oxo-11H-dibenzo[b,e][1,4]dioxepine-6-carboxylic acid, CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, ...
Authors:Guo, Z, Deraeve, C, Bon, R.S, Alexandrov, K, Waldmann, H, Wu, Y.W, Goody, R.S, Blankenfeldt, W.
Deposit date:2012-04-02
Release date:2012-05-30
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Psoromic Acid is a Selective and Covalent Rab-Prenylation Inhibitor Targeting Autoinhibited RabGGTase
J.Am.Chem.Soc., 134, 2012
4EH2
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BU of 4eh2 by Molmil
Human p38 MAP kinase in complex with NP-F1 and RL87
Descriptor: 3-phenylquinazolin-4(3H)-one, Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine
Authors:Over, B, Gruetter, C, Waldmann, H, Rauh, D.
Deposit date:2012-04-02
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Natural-product-derived fragments for fragment-based ligand discovery.
Nat Chem, 5, 2012
4EGW
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BU of 4egw by Molmil
The structure of the soluble domain of CorA from Methanocaldococcus jannaschii
Descriptor: 1,4-BUTANEDIOL, HEXANE-1,6-DIOL, MAGNESIUM ION, ...
Authors:Guskov, A, Nordin, N, Reynaud, A, Engman, H, Lundback, A.-K, Jong, A.J.O, Cornvik, T, Phua, T, Eshaghi, S.
Deposit date:2012-04-02
Release date:2012-10-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the mechanisms of Mg2+ uptake, transport, and gating by CorA
Proc.Natl.Acad.Sci.USA, 109, 2012
4EH7
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BU of 4eh7 by Molmil
Human p38 MAP kinase in complex with NP-F6 and RL87
Descriptor: (3-phenoxyphenyl)methanol, Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine
Authors:Over, B, Gruetter, C, Waldmann, H, Rauh, D.
Deposit date:2012-04-02
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Natural-product-derived fragments for fragment-based ligand discovery.
Nat Chem, 5, 2012
4EH5
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BU of 4eh5 by Molmil
Human p38 MAP kinase in complex with NP-F4 and RL87
Descriptor: Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine, benzyl pyridine-3-carboxylate
Authors:Over, B, Gruetter, C, Waldmann, H, Rauh, D.
Deposit date:2012-04-02
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Natural-product-derived fragments for fragment-based ligand discovery.
Nat Chem, 5, 2012
4FGP
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BU of 4fgp by Molmil
Legionella pneumophila LapG (EGTA-treated)
Descriptor: Periplasmic protein
Authors:Chatterjee, D, Boyd, C.D, O'Toole, G.A, Sondermann, H.
Deposit date:2012-06-04
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural characterization of a conserved, calcium-dependent periplasmic protease from Legionella pneumophila.
J.Bacteriol., 194, 2012
7K5L
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BU of 7k5l by Molmil
Ebola virus VP40 octameric ring generated by an RNA oligonucleotide
Descriptor: HSP RNA oligonucleotide, Matrix protein VP40
Authors:Landeras-Bueno, S, Wasserman, H, Salie, Z.L, Saphire, E.O.
Deposit date:2020-09-17
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Cellular mRNA triggers structural transformation of Ebola virus matrix protein VP40 to its essential regulatory form.
Cell Rep, 35, 2021
7K5D
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BU of 7k5d by Molmil
Ebola virus VP40 octameric ring generated by a DNA oligonucleotide
Descriptor: HSP DNA oligonucleotide, Matrix protein VP40
Authors:Landeras-Bueno, S, Wasserman, H, Salie, Z.L, Saphire, E.O.
Deposit date:2020-09-16
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Cellular mRNA triggers structural transformation of Ebola virus matrix protein VP40 to its essential regulatory form.
Cell Rep, 35, 2021
6S2V
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BU of 6s2v by Molmil
Structure of the N-terminal catalytic region of T. thermophilus Rel
Descriptor: (P)ppGpp synthetase I, SpoT/RelA, CHLORIDE ION, ...
Authors:Garcia-Pino, A.
Deposit date:2019-06-22
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:A nucleotide-switch mechanism mediates opposing catalytic activities of Rel enzymes.
Nat.Chem.Biol., 16, 2020
6S2T
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BU of 6s2t by Molmil
Structure of the N-terminal catalytic region of T. thermophilus Rel bound to ppGpp
Descriptor: (P)ppGpp synthetase I, SpoT/RelA, CHLORIDE ION, ...
Authors:Garcia-Pino, A.
Deposit date:2019-06-22
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A nucleotide-switch mechanism mediates opposing catalytic activities of Rel enzymes.
Nat.Chem.Biol., 16, 2020
6S2U
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BU of 6s2u by Molmil
Structure of the catalytic domain of T. thermophilus Rel in complex with AMP and ppGpp
Descriptor: (P)ppGpp synthetase I, SpoT/RelA, ADENOSINE MONOPHOSPHATE, ...
Authors:Garcia-Pino, A.
Deposit date:2019-06-22
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A nucleotide-switch mechanism mediates opposing catalytic activities of Rel enzymes.
Nat.Chem.Biol., 16, 2020
4K4E
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BU of 4k4e by Molmil
Co-crystal structure of tnks1 with compound 52 [N~2-(5-chloro-2-methoxyphenyl)-N-[trans-4-(2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)cyclohexyl]glycinamide]
Descriptor: N~2~-(5-chloro-2-methoxyphenyl)-N-[trans-4-(2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)cyclohexyl]glycinamide, Tankyrase-1, ZINC ION
Authors:Huang, X.
Deposit date:2013-04-12
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of novel, induced-pocket binding oxazolidinones as potent, selective, and orally bioavailable tankyrase inhibitors.
J.Med.Chem., 56, 2013
4I9I
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BU of 4i9i by Molmil
Crystal structure of tankyrase 1 with compound 4
Descriptor: N-(2-methoxyphenyl)-4-{[3-(4-oxo-3,4-dihydroquinazolin-2-yl)propanoyl]amino}benzamide, Tankyrase-1, ZINC ION
Authors:Huang, X.
Deposit date:2012-12-05
Release date:2013-02-06
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of a class of novel tankyrase inhibitors that bind to both the nicotinamide pocket and the induced pocket.
J.Med.Chem., 56, 2013
6OML
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BU of 6oml by Molmil
Human BMP chimera BV261
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bone morphogenetic protein 2 and Bone morphogenetic protein 6, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Seeherman, H, Juo, Z.S.
Deposit date:2019-04-18
Release date:2019-05-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A BMP/activin A chimera is superior to native BMPs and induces bone repair in nonhuman primates when delivered in a composite matrix.
Sci Transl Med, 11, 2019
7YM0
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BU of 7ym0 by Molmil
Lysoplasmalogen-specific phospholipase D (LyPls-PLD) with Ca2+
Descriptor: CALCIUM ION, Lysoplasmalogenase
Authors:Yasutake, Y, Sakasegawa, S, Sugimori, D, Murayama, K.
Deposit date:2022-07-27
Release date:2023-01-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structural basis for the substrate specificity switching of lysoplasmalogen-specific phospholipase D from Thermocrispum sp. RD004668.
Biosci.Biotechnol.Biochem., 87, 2022
9FL3
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BU of 9fl3 by Molmil
Crystal structure of IL-17A in complex with compound 26
Descriptor: (~{E})-~{N}-[(~{S})-[4,4-bis(fluoranyl)cyclohexyl]-[7-[(1~{S})-2-methoxy-1-[(4~{S})-2-oxidanylidene-4-(trifluoromethyl)imidazolidin-1-yl]ethyl]imidazo[1,2-b]pyridazin-2-yl]methyl]-3-cyclopropyl-2-fluoranyl-prop-2-enamide, Interleukin-17A
Authors:Rondeau, J.M, Lehmann, S, Scheufler, C.
Deposit date:2024-06-04
Release date:2024-10-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.068 Å)
Cite:Discovery and In Vivo Exploration of 1,3,4-Oxadiazole and alpha-Fluoroacrylate Containing IL-17 Inhibitors.
J.Med.Chem., 67, 2024
9FKX
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BU of 9fkx by Molmil
Crystal structure of IL-17A in complex with compound 18
Descriptor: (4~{S})-1-[(~{R})-[2-[(~{S})-[4,4-bis(fluoranyl)cyclohexyl]-[[5-[1,1-bis(fluoranyl)ethyl]-1,3,4-oxadiazol-2-yl]amino]methyl]imidazo[1,2-b]pyridazin-7-yl]-cyclopropyl-methyl]-4-(trifluoromethyl)imidazolidin-2-one, Interleukin-17A
Authors:Rondeau, J.M, Lehmann, S, Scheufler, C.
Deposit date:2024-06-04
Release date:2024-10-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.048 Å)
Cite:Discovery and In Vivo Exploration of 1,3,4-Oxadiazole and alpha-Fluoroacrylate Containing IL-17 Inhibitors.
J.Med.Chem., 67, 2024
4G16
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BU of 4g16 by Molmil
Crystal structure of ck1g3 with 2-[(4-{[3-(TRIFLUOROMETHYL)PYRIDIN2-YL]OXY}PHENYL)AMINO]-1H-BENZIMIDAZOLE-6-CARBONITRILE
Descriptor: 2-[(4-{[3-(trifluoromethyl)pyridin-2-yl]oxy}phenyl)amino]-1H-benzimidazole-6-carbonitrile, Casein kinase I isoform gamma-3
Authors:Huang, X.
Deposit date:2012-07-10
Release date:2013-05-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:2-Phenylamino-6-cyano-1H-benzimidazole-based isoform selective casein kinase 1 gamma (CK1g)inhibitors
Bioorg.Med.Chem.Lett., 22, 2012
4G17
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BU of 4g17 by Molmil
Crystal structure of ck1g3 with 2-[(4-TERT-BUTYLPHENYL)AMINO]-1H-BENZIMIDAZOLE-6-CARBONITRILE
Descriptor: 2-[(4-tert-butylphenyl)amino]-1H-benzimidazole-6-carbonitrile, Casein kinase I isoform gamma-3
Authors:Huang, X.
Deposit date:2012-07-10
Release date:2013-05-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:2-Phenylamino-6-cyano-1H-benzimidazole-based isoform selective casein kinase 1 gamma (CK1g)inhibitors
Bioorg.Med.Chem.Lett., 22, 2012
1BYX
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BU of 1byx by Molmil
CHIMERIC HYBRID DUPLEX R(GCAGUGGC).R(GCCA)D(CTGC) COMPRISING THE TRNA-DNA JUNCTION FORMED DURING INITIATION OF HIV-1 REVERSE TRANSCRIPTION
Descriptor: DNA/RNA (5'-R(*GP*CP*CP*A)-D(P*CP*TP*GP*C)-3'), RNA (5'-R(*GP*CP*AP*GP*UP*GP*GP*C)-3')
Authors:Szyperski, T, Goette, M, Billeter, M, Perola, E, Cellai, L.
Deposit date:1998-10-20
Release date:1999-10-20
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of the chimeric hybrid duplex r(gcaguggc).r(gcca)d(CTGC) comprising the tRNA-DNA junction formed during initiation of HIV-1 reverse transcription.
J.Biomol.NMR, 13, 1999

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