Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3WHC
DownloadVisualize
BU of 3whc by Molmil
Crystal structure of a transcriptional regulator FadR from Bacillus subtilis in complex with stearoyl-CoA
Descriptor: Fatty acid metabolism regulator protein, STEAROYL-COENZYME A
Authors:Fujihashi, M, Nakatani, T, Miki, K.
Deposit date:2013-08-23
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation.
Proteins, 82, 2014
3WR2
DownloadVisualize
BU of 3wr2 by Molmil
RNase Po1 complexed with 3'GMP
Descriptor: GUANOSINE-3'-MONOPHOSPHATE, Guanyl-specific ribonuclease Po1
Authors:Hara, Y, Katsutani, T, Kobayashi, H, Suzuki, M.
Deposit date:2014-02-13
Release date:2015-02-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:RNase Po1 complexed with 3'GMP
to be published
5DMQ
DownloadVisualize
BU of 5dmq by Molmil
Crystal structure of mouse eRF1 in complex with Reverse Transcriptase (RT) of Moloney Murine Leukemia Virus
Descriptor: Eukaryotic peptide chain release factor subunit 1, Reverse transcriptase/ribonuclease H p80
Authors:Tang, T, Song, H.
Deposit date:2015-09-09
Release date:2016-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus
Nat Commun, 7, 2016
7PB9
DownloadVisualize
BU of 7pb9 by Molmil
Crystal structure of tandem WH domains of Vps25 from Odinarchaeota
Descriptor: Tandem WH domains of Vps25
Authors:Salzer, R, Bellini, D, Papatziamou, D, Robinson, N.P, Lowe, J.
Deposit date:2021-08-01
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Asgard archaea shed light on the evolutionary origins of the eukaryotic ubiquitin-ESCRT machinery.
Nat Commun, 13, 2022
7PQR
DownloadVisualize
BU of 7pqr by Molmil
LsAA9A expressed in E. coli
Descriptor: ACETATE ION, Auxiliary activity 9, CHLORIDE ION, ...
Authors:Muderspach, S.J, Metherall, J, Ipsen, J, Rollan, C.H, Norholm, M, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-09-20
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
6JMF
DownloadVisualize
BU of 6jmf by Molmil
Crystal structure of human tyrosine-protein kinase Fes/Fps in complex with compound 4
Descriptor: 6-{[(1R,2S)-2-aminocyclohexyl]amino}-5-cyano-2-[(3-methylphenyl)amino]pyridine-3-carboxamide, SULFATE ION, Tyrosine-protein kinase Fes/Fps
Authors:Baba, D, Hanzawa, H.
Deposit date:2019-03-08
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Novel Pyrido-pyridazinone Derivatives as FER Tyrosine Kinase Inhibitors with Antitumor Activity.
Acs Med.Chem.Lett., 10, 2019
5Y0P
DownloadVisualize
BU of 5y0p by Molmil
Crystal structure of Bacillus subtilis TmcAL bound with alpha-thio ATP
Descriptor: ADENOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, UPF0348 protein B4417_3650
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0S
DownloadVisualize
BU of 5y0s by Molmil
Crystal structure of apo Thermotoga maritima TmcAL(Form II)
Descriptor: 1,2-ETHANEDIOL, Thermotoga maritima TmcAL
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0R
DownloadVisualize
BU of 5y0r by Molmil
Crystal structure of Thermotoga maritima TmcAL (apo, form I)
Descriptor: TmTmcAL(SeMet)
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2018-12-26
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0N
DownloadVisualize
BU of 5y0n by Molmil
Crystal structure of Bacillus subtilis TmcAL bound with ATP (SeMet derivative)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, UPF0348 protein B4417_3650
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2018-12-26
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0Q
DownloadVisualize
BU of 5y0q by Molmil
Crystal structure of BsTmcAL bound with AMPCPP
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, UPF0348 protein B4417_3650
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0O
DownloadVisualize
BU of 5y0o by Molmil
Crystal structure of apo BsTmcAL
Descriptor: UPF0348 protein B4417_3650
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
5Y0T
DownloadVisualize
BU of 5y0t by Molmil
Crystal structure of Thermotoga maritima TmcAL bound with alpha-thio ATP(Form II)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, PENTAETHYLENE GLYCOL, ...
Authors:Yamashita, S, Tomita, K.
Deposit date:2017-07-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
Nat. Chem. Biol., 14, 2018
8YRP
DownloadVisualize
BU of 8yrp by Molmil
SARS-CoV-2 Delta Spike in complex with JM-1A
Descriptor: JM-1A Heavy Chain, JM-1A Light Chain, Spike glycoprotein
Authors:Nguyen, V.H.T, Chen, X.
Deposit date:2024-03-21
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8X0X
DownloadVisualize
BU of 8x0x by Molmil
Crystal structure of JE-5C in complex with SARS-CoV-2 RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of JE-5C Fab, Light chain of JE-5C Fab, ...
Authors:Mohapatra, A, Chen, X.
Deposit date:2023-11-06
Release date:2024-06-05
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8X0Y
DownloadVisualize
BU of 8x0y by Molmil
Crystal structure of JM-1A in complex with SARS-CoV-2 RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Heavy chain of JM-1A Fab, ...
Authors:Mohapatra, A, Chen, X.
Deposit date:2023-11-06
Release date:2024-06-05
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8YZ5
DownloadVisualize
BU of 8yz5 by Molmil
SARS-CoV-2 Delta Spike in complex with Fab of JE-5C
Descriptor: Fab heavy chain of JE-5C, Fab light chain of JE-5C, Spike glycoprotein
Authors:Chen, X, Wu, Y.-M.
Deposit date:2024-04-06
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8YRO
DownloadVisualize
BU of 8yro by Molmil
SARS-CoV-2 Delta Spike in complex with JL-8C
Descriptor: JL-8C Heavy Chain, JL-8C Light Chain, Spike glycoprotein
Authors:Nguyen, V.H.T, Chen, X.
Deposit date:2024-03-21
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8YZ6
DownloadVisualize
BU of 8yz6 by Molmil
SARS-CoV-2 Spike (BA.1) in complex with Fab of JH-8B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain of JH-8B, ...
Authors:Chen, X, Wu, Y.-M.
Deposit date:2024-04-06
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4.55 Å)
Cite:The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine.
Plos Pathog., 20, 2024
8BSE
DownloadVisualize
BU of 8bse by Molmil
CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD) in complex with 1D1 Fab
Descriptor: 1D1 FAB HEAVY CHAIN, 1D1 FAB LIGHT CHAIN, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Welin, M, Kimbung, Y.R, Focht, D, Pisitkun, T.
Deposit date:2022-11-25
Release date:2023-05-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Efficacy of the combination of monoclonal antibodies against the SARS-CoV-2 Beta and Delta variants.
Plos One, 18, 2023
8BSF
DownloadVisualize
BU of 8bsf by Molmil
CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD-beta variant) in complex with 3D2 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3D2 FAB HEAVY CHAIN, 3D2 FAB LIGHT CHAIN, ...
Authors:Welin, M, Kimbung, Y.R, Focht, D, Pisitkun, T.
Deposit date:2022-11-25
Release date:2023-05-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Efficacy of the combination of monoclonal antibodies against the SARS-CoV-2 Beta and Delta variants.
Plos One, 18, 2023
3UG2
DownloadVisualize
BU of 3ug2 by Molmil
Crystal structure of the mutated EGFR kinase domain (G719S/T790M) in complex with gefitinib
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Epidermal growth factor receptor, Gefitinib
Authors:Parker, L.J, Handa, N, Yoshikawa, S, Kukimoto-Niino, M, Shirouzu, M, Yokoyama, S.
Deposit date:2011-11-02
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the altered drug sensitivities of non-small cell lung cancer-associated mutants of human epidermal growth factor receptor
Oncogene, 32, 2013
3UG4
DownloadVisualize
BU of 3ug4 by Molmil
Crystal structure of alpha-L-arabinofuranosidase from Thermotoga maritima arabinose complex
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-L-arabinofuranosidase, alpha-L-arabinofuranose
Authors:Im, D.-H, Miyazaki, K, Wakagi, T, Fushinobu, S.
Deposit date:2011-11-02
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structures of Glycoside Hydrolase Family 51 alpha-L-Arabinofuranosidase from Thermotoga maritima
Biosci.Biotechnol.Biochem., 76, 2012
3UG5
DownloadVisualize
BU of 3ug5 by Molmil
Crystal structure of alpha-L-arabinofuranosidase from Thermotoga maritima xylose complex
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-L-arabinofuranosidase, beta-D-xylopyranose
Authors:Im, D.-H, Miyazaki, K, Wakagi, T, Fushinobu, S.
Deposit date:2011-11-02
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Glycoside Hydrolase Family 51 alpha-L-Arabinofuranosidase from Thermotoga maritima
Biosci.Biotechnol.Biochem., 76, 2012
3UG3
DownloadVisualize
BU of 3ug3 by Molmil
Crystal structure of alpha-L-arabinofuranosidase from Thermotoga maritima ligand free form
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-L-arabinofuranosidase, ...
Authors:Im, D.-H, Miyazaki, K, Wakagi, T, Fushinobu, S.
Deposit date:2011-11-02
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Glycoside Hydrolase Family 51 alpha-L-Arabinofuranosidase from Thermotoga maritima
Biosci.Biotechnol.Biochem., 76, 2012

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon