Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4Z0M
DownloadVisualize
BU of 4z0m by Molmil
EchA5 Mycobacterium tuberculosis
Descriptor: Enoyl-CoA hydratase
Authors:Chaudhary, S, Gokhale, R.S.
Deposit date:2015-03-26
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Unsaturated Lipid Assimilation by Mycobacteria Requires Auxiliary cis-trans Enoyl CoA Isomerase
Chem.Biol., 22, 2015
4ZXI
DownloadVisualize
BU of 4zxi by Molmil
Crystal Structure of holo-AB3403 a four domain nonribosomal peptide synthetase bound to AMP and Glycine
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, 4'-PHOSPHOPANTETHEINE, ADENOSINE MONOPHOSPHATE, ...
Authors:Drake, E.J, Miller, B.R, Allen, C.L, Gulick, A.M.
Deposit date:2015-05-20
Release date:2015-12-30
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of two distinct conformations of holo-non-ribosomal peptide synthetases.
Nature, 529, 2016
4ZXH
DownloadVisualize
BU of 4zxh by Molmil
Crystal Structure of holo-AB3403 a four domain nonribosomal peptide synthetase from Acinetobacter Baumanii
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 4'-PHOSPHOPANTETHEINE, ABBFA_003403, ...
Authors:Drake, E.J, Miller, B.R, Allen, C.L, Gulick, A.M.
Deposit date:2015-05-20
Release date:2015-12-30
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of two distinct conformations of holo-non-ribosomal peptide synthetases.
Nature, 529, 2016
8GUN
DownloadVisualize
BU of 8gun by Molmil
Crystal structure of mutant H528A of EsaD from Staphylococcus aureus
Descriptor: MAGNESIUM ION, Type VII secretion system protein EssD
Authors:Zhang, Z.M, Wang, Y.J.
Deposit date:2022-09-13
Release date:2022-11-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.30001378 Å)
Cite:A toxin-deformation dependent inhibition mechanism in the T7SS toxin-antitoxin system of Gram-positive bacteria.
Nat Commun, 13, 2022
8GUP
DownloadVisualize
BU of 8gup by Molmil
Crystal structure of EsaG from Staphylococcus aureus
Descriptor: CITRIC ACID, Type VII secretion system protein EsaG
Authors:Zhang, Z.M, Wang, Y.J.
Deposit date:2022-09-13
Release date:2022-11-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.298725 Å)
Cite:A toxin-deformation dependent inhibition mechanism in the T7SS toxin-antitoxin system of Gram-positive bacteria.
Nat Commun, 13, 2022
8GUO
DownloadVisualize
BU of 8guo by Molmil
Crystal structure of the nuclease domain of EsaD in complex with EsaG from Staphylococcus aureus
Descriptor: Type VII secretion system protein EsaG, Type VII secretion system protein EssD
Authors:Zhang, Z.M, Wang, Y.J.
Deposit date:2022-09-13
Release date:2022-11-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5939517 Å)
Cite:A toxin-deformation dependent inhibition mechanism in the T7SS toxin-antitoxin system of Gram-positive bacteria.
Nat Commun, 13, 2022
5E0N
DownloadVisualize
BU of 5e0n by Molmil
Crystal Structure of MSMEG_3139, a monofunctional enoyl CoA isomerase from M.smegmatis
Descriptor: Enoyl-CoA hydratase/isomerase
Authors:Priyadarshan, K, Haque, A.S, Anandakrishnan, M, Sankaranarayanan, R.
Deposit date:2015-09-29
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.061 Å)
Cite:Unsaturated Lipid Assimilation by Mycobacteria Requires Auxiliary cis-trans Enoyl CoA Isomerase.
Chem.Biol., 22, 2015
7YK2
DownloadVisualize
BU of 7yk2 by Molmil
Cryo-EM structure of Apo-alpha-syn fibril
Descriptor: Alpha-synuclein
Authors:Xu, Q.H, Xia, W.C, Tao, Y.Q, Liu, C.
Deposit date:2022-07-21
Release date:2023-03-22
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Conformational Dynamics of an alpha-Synuclein Fibril upon Receptor Binding Revealed by Insensitive Nuclei Enhanced by Polarization Transfer-Based Solid-State Nuclear Magnetic Resonance and Cryo-Electron Microscopy.
J.Am.Chem.Soc., 145, 2023
7YK8
DownloadVisualize
BU of 7yk8 by Molmil
Cryo-EM structure of dLAG3-alpha-syn fibril
Descriptor: Alpha-synuclein
Authors:Xu, Q.H, Xia, W.C, Tao, Y.Q, Liu, C.
Deposit date:2022-07-22
Release date:2023-03-22
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Conformational Dynamics of an alpha-Synuclein Fibril upon Receptor Binding Revealed by Insensitive Nuclei Enhanced by Polarization Transfer-Based Solid-State Nuclear Magnetic Resonance and Cryo-Electron Microscopy.
J.Am.Chem.Soc., 145, 2023
7CAL
DownloadVisualize
BU of 7cal by Molmil
Cryo-EM Structure of the Hyperpolarization-Activated Inwardly Rectifying Potassium Channel KAT1 from Arabidopsis
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Potassium channel KAT1
Authors:Li, S.Y, Yang, F, Sun, D.M, Zhang, Y, Zhang, M.G, Zhou, P, Liu, S.L, Zhang, Y.N, Zhang, L.H, Tian, C.L.
Deposit date:2020-06-09
Release date:2020-07-29
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the hyperpolarization-activated inwardly rectifying potassium channel KAT1 from Arabidopsis.
Cell Res., 30, 2020
7CRN
DownloadVisualize
BU of 7crn by Molmil
The Functional Characterization and Crystal Structure of the Bifunctional Thioesterase Catalyzing Epimerization and Cyclization
Descriptor: Non-ribosomal peptide synthetase 4
Authors:Yu, J.H, Song, J, Chi, C.B, Ma, M.
Deposit date:2020-08-14
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Functional Characterization and Crystal Structure of the Bifunctional Thioesterase Catalyzing Epimerization and Cyclization in Skyllamycin Biosynthesis
Acs Catalysis, 11, 2021
7DXO
DownloadVisualize
BU of 7dxo by Molmil
The mutant of bifunctional thioesterase catalyzing epimerization and cyclization
Descriptor: Non-ribosomal peptide synthetase 4
Authors:Yu, J.H, Song, J, Chi, C.B, Ma, M.
Deposit date:2021-01-19
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional Characterization and Crystal Structure of the Bifunctional Thioesterase Catalyzing Epimerization and Cyclization in Skyllamycin Biosynthesis
Acs Catalysis, 11, 2021
6MU4
DownloadVisualize
BU of 6mu4 by Molmil
Bst DNA polymerase I FANA/DNA binary complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(P*GP*CP*GP*AP*TP*CP*AP*CP*GP*T)-3'), DNA polymerase I, ...
Authors:Jackson, L.N, Chim, N, Chaput, J.C.
Deposit date:2018-10-22
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structures of a natural DNA polymerase that functions as an XNA reverse transcriptase.
Nucleic Acids Res., 47, 2019
6MU5
DownloadVisualize
BU of 6mu5 by Molmil
Bst DNA polymerase I TNA/DNA binary complex
Descriptor: DNA (5'-D(P*GP*CP*GP*AP*TP*CP*AP*CP*GP*T)-3'), DNA polymerase I, SULFATE ION, ...
Authors:Jackson, L.N, Chim, N, Chaput, J.C.
Deposit date:2018-10-22
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.912 Å)
Cite:Crystal structures of a natural DNA polymerase that functions as an XNA reverse transcriptase.
Nucleic Acids Res., 47, 2019
8IC8
DownloadVisualize
BU of 8ic8 by Molmil
Exo-alpha-D-arabinofuranosidase from Microbacterium arabinogalactanolyticum
Descriptor: Exo-alpha-D-arabinofuranosidase, PHOSPHATE ION
Authors:Kashima, T, Arakawa, T, Yamada, C, Ishiwata, A, Fujita, K, Fushinobu, S.
Deposit date:2023-02-11
Release date:2023-08-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
7XHF
DownloadVisualize
BU of 7xhf by Molmil
Crystal structure of the NTF2L domain of human G3BP1 in complex with the USP10 derived peptide
Descriptor: Ras GTPase-activating protein-binding protein 1, USP10/6-21
Authors:Dan, S, Weimin, G.
Deposit date:2022-04-08
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Yin and yang regulation of stress granules by Caprin-1.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XHG
DownloadVisualize
BU of 7xhg by Molmil
Crystal structure of the NTF2L domain of human G3BP1 in complex with the Caprin-1 derived peptide
Descriptor: Caprin-1(369-378), Ras GTPase-activating protein-binding protein 1
Authors:Dan, S, Weimin, G.
Deposit date:2022-04-08
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Yin and yang regulation of stress granules by Caprin-1.
Proc.Natl.Acad.Sci.USA, 119, 2022
6KZ5
DownloadVisualize
BU of 6kz5 by Molmil
Crystal Structure Analysis of the Csn-B-bounded NUR77 Ligand binding Domain
Descriptor: Nuclear receptor subfamily 4 group A member 1, ethyl 2-[2-octanoyl-3,5-bis(oxidanyl)phenyl]ethanoate
Authors:Hong, W, Chen, H, Wu, Q, Lin, T.
Deposit date:2019-09-23
Release date:2020-10-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.45 Å)
Cite:Blocking PPAR gamma interaction facilitates Nur77 interdiction of fatty acid uptake and suppresses breast cancer progression.
Proc.Natl.Acad.Sci.USA, 117, 2020
8IC7
DownloadVisualize
BU of 8ic7 by Molmil
exo-beta-D-arabinofuranosidase ExoMA2 from Microbacterium arabinogalactanolyticum in complex with beta-D-arabinofuranose
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Fukushima, R, Kashima, T, Ishiwata, A, Fujita, K, Fushinobu, S.
Deposit date:2023-02-11
Release date:2023-08-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
8IC6
DownloadVisualize
BU of 8ic6 by Molmil
exo-beta-D-arabinanase ExoMA2 from Microbacterium arabinogalactanolyticum in complex with Tris
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Fukushima, R, Kashima, T, Ishiwata, A, Fujita, K, Fushinobu, S.
Deposit date:2023-02-10
Release date:2023-08-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
3RG2
DownloadVisualize
BU of 3rg2 by Molmil
Structure of a two-domain NRPS fusion protein containing the EntE adenylation domain and EntB aryl-carrier protein from enterobactin biosynthesis
Descriptor: 4'-PHOSPHOPANTETHEINE, 5'-deoxy-5'-({[2-(2-hydroxyphenyl)ethyl]sulfonyl}amino)adenosine, Enterobactin synthase component E (entE), ...
Authors:Sundlov, J.A, Gulick, A.M.
Deposit date:2011-04-07
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and Functional Investigation of the Intermolecular Interaction between NRPS Adenylation and Carrier Protein Domains.
Chem.Biol., 19, 2012
5VU5
DownloadVisualize
BU of 5vu5 by Molmil
TNA polymerase, apo
Descriptor: DNA polymerase
Authors:Chim, N, Chaput, J.C.
Deposit date:2017-05-18
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for TNA synthesis by an engineered TNA polymerase.
Nat Commun, 8, 2017
5VU9
DownloadVisualize
BU of 5vu9 by Molmil
TNA polymerase, translocated product
Descriptor: DNA polymerase, DNA template, DNA/TNA hybrid primer
Authors:Chim, N, Chaput, J.C.
Deposit date:2017-05-18
Release date:2017-12-06
Last modified:2017-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for TNA synthesis by an engineered TNA polymerase.
Nat Commun, 8, 2017
5VU8
DownloadVisualize
BU of 5vu8 by Molmil
TNA polymerase, closed ternary complex
Descriptor: DNA polymerase, DNA template, DNA/TNA hybrid primer, ...
Authors:Chim, N, Chaput, J.C.
Deposit date:2017-05-18
Release date:2017-12-06
Last modified:2017-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for TNA synthesis by an engineered TNA polymerase.
Nat Commun, 8, 2017
5VU6
DownloadVisualize
BU of 5vu6 by Molmil
TNA polymerase binary complex with primer/template duplex
Descriptor: DNA polymerase, DNA template, DNA/TNA hybrid primer
Authors:Chim, N, Chaput, J.C.
Deposit date:2017-05-18
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for TNA synthesis by an engineered TNA polymerase.
Nat Commun, 8, 2017

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon