Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2DLM
DownloadVisualize
BU of 2dlm by Molmil
Solution structure of the first SH3 domain of human vinexin
Descriptor: Vinexin
Authors:Zhang, H.P, Izumi, K, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-20
Release date:2006-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first SH3 domain of human vinexin
To be published
2DM1
DownloadVisualize
BU of 2dm1 by Molmil
Solution structure of the second SH3 domain of human protein vav-2
Descriptor: Protein vav-2
Authors:Endo, H, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-20
Release date:2007-04-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second SH3 domain of human protein vav-2
To be Published
2DNT
DownloadVisualize
BU of 2dnt by Molmil
Solution Structure of RSGI RUH-064, a Chromo Domain from Human cDNA
Descriptor: Chromodomain protein, Y chromosome-like, isoform b
Authors:Ruhul Momen, A.Z.M, Hirota, H, Izumi, K, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-26
Release date:2006-10-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-064, a Chromo Domain from Human cDNA
to be published
2DKS
DownloadVisualize
BU of 2dks by Molmil
Solution structure of the first IG-like domain of human carcinoembryonic antigen related cell adhesion molecule 8
Descriptor: Carcinoembryonic antigen-related cell adhesion molecule 8
Authors:Nagashima, K, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-14
Release date:2007-05-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first IG-like domain of human carcinoembryonic antigen related cell adhesion molecule 8
To be Published
2DLY
DownloadVisualize
BU of 2dly by Molmil
Solution structure of the SH2 domain of murine Fyn-related kinase
Descriptor: Fyn-related kinase
Authors:Endo, H, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-20
Release date:2006-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH2 domain of murine Fyn-related kinase
To be Published
2DMI
DownloadVisualize
BU of 2dmi by Molmil
Solution structure of the first and the second zf-C2H2 like domains of human Teashirt homolog 3
Descriptor: Teashirt homolog 3, ZINC ION
Authors:Endo, H, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-21
Release date:2006-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first and the second zf-C2H2 like domains of human Teashirt homolog 3
To be Published
2DLP
DownloadVisualize
BU of 2dlp by Molmil
Solution structure of the SH3 domain of human KIAA1783 protein
Descriptor: KIAA1783 protein
Authors:Qin, X.R, Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-20
Release date:2006-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of human KIAA1783 protein
To be published
2DM4
DownloadVisualize
BU of 2dm4 by Molmil
Solution structure of the second fn3 domain of human sorLA/LR11
Descriptor: Sortilin-related receptor
Authors:Nagashima, T, Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-20
Release date:2006-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second fn3 domain of human sorLA/LR11
To be Published
2EBQ
DownloadVisualize
BU of 2ebq by Molmil
Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153
Descriptor: Nuclear pore complex protein Nup153, ZINC ION
Authors:Zhang, H.P, Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-09
Release date:2007-08-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153
To be published
2EGA
DownloadVisualize
BU of 2ega by Molmil
Solution structure of the first SH3 domain from human KIAA0418 protein
Descriptor: SH3 and PX domain-containing protein 2A
Authors:Inoue, K, Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-28
Release date:2007-08-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first SH3 domain from human KIAA0418 protein
to be published
2EO2
DownloadVisualize
BU of 2eo2 by Molmil
Solution structure of the insertion region (510-573) of FTHFS domain from mouse methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein
Descriptor: Adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230045M11 product:weakly similar to C1-tetrahydrofolate synthase
Authors:Kurosaki, C, Nagashima, T, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the insertion region (510-573) of FTHFS domain from mouse methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like protein
To be Published
2EDK
DownloadVisualize
BU of 2edk by Molmil
Solution structure of the third ig-like domain from human Myosin-binding protein C, fast-type
Descriptor: Myosin-binding protein C, fast-type
Authors:Sano, R, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-14
Release date:2007-08-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the third ig-like domain from human Myosin-binding protein C, fast-type
to be published
2EGC
DownloadVisualize
BU of 2egc by Molmil
Solution structure of the fifth SH3 domain from human KIAA0418 protein
Descriptor: SH3 and PX domain-containing protein 2A
Authors:Inoue, K, Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-28
Release date:2007-08-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the fifth SH3 domain from human KIAA0418 protein
To be Published
2EM0
DownloadVisualize
BU of 2em0 by Molmil
Solution structure of the 18th zf-C2H2 domain from human Zinc finger protein 224
Descriptor: ZINC ION, Zinc finger protein 224
Authors:Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 18th zf-C2H2 domain from human Zinc finger protein 224
To be Published
2DLQ
DownloadVisualize
BU of 2dlq by Molmil
Solution structure of the tandem four zf-C2H2 domain repeats of murine GLI-Kruppel family member HKR3
Descriptor: GLI-Kruppel family member HKR3, ZINC ION
Authors:Inoue, K, Hayashi, F, Izumi, K, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-20
Release date:2006-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the tandem four zf-C2H2 domain repeats of murine GLI-Kruppel family member HKR3
To be published
2EDH
DownloadVisualize
BU of 2edh by Molmil
Solution structure of the PDZ domain (3614- 3713 ) from human obscurin
Descriptor: Obscurin
Authors:Endo, H, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-14
Release date:2007-08-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the PDZ domain ( 3614 - 3713 ) from human obscurin
To be Published
2EDN
DownloadVisualize
BU of 2edn by Molmil
Solution structure of the first ig-like domain from human Myosin-binding protein C, fast-type
Descriptor: Myosin-binding protein C, fast-type
Authors:Nagashima, K, Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-14
Release date:2007-08-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first ig-like domain from human Myosin-binding protein C, fast-type
To be Published
2ELZ
DownloadVisualize
BU of 2elz by Molmil
Solution structure of the 17th zf-C2H2 domain from human Zinc finger protein 224
Descriptor: ZINC ION, Zinc finger protein 224
Authors:Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 17th zf-C2H2 domain from human Zinc finger protein 224
To be Published
5ZQR
DownloadVisualize
BU of 5zqr by Molmil
Tankyrase-2 in complex with compound 40c
Descriptor: 2-[4,6-difluoro-1-(2-hydroxyethyl)-1,2-dihydro-1'H-spiro[indole-3,4'-piperidin]-1'-yl]-5,6,7,8-tetrahydroquinazolin-4(3H)-one, GLYCEROL, PHOSPHATE ION, ...
Authors:Niwa, H, Shirai, F, Sato, S, Yoshimoto, N, Tsumura, T, Okue, M, Shirouzu, M, Seimiya, H, Umehara, T.
Deposit date:2018-04-19
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
6A84
DownloadVisualize
BU of 6a84 by Molmil
Tankyrase-2 in complex with compound 15d
Descriptor: 2-(4-chloro-1,2-dihydro-1'H-spiro[indole-3,4'-piperidin]-1'-yl)-5,6,7,8-tetrahydroquinazolin-4(3H)-one, GLYCEROL, PHOSPHATE ION, ...
Authors:Niwa, H, Shirai, F, Sato, S, Yoshimoto, N, Tsumura, T, Okue, M, Shirouzu, M, Seimiya, H, Umehara, T.
Deposit date:2018-07-06
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
5ZQO
DownloadVisualize
BU of 5zqo by Molmil
Tankyrase-2 in complex with compound 1a
Descriptor: 2-[4-(2-methoxyphenyl)piperazin-1-yl]-5,6,7,8-tetrahydroquinazolin-4(3H)-one, GLYCEROL, SULFATE ION, ...
Authors:Niwa, H, Shirai, F, Sato, S, Yoshimoto, N, Tsumura, T, Okue, M, Shirouzu, M, Seimiya, H, Umehara, T.
Deposit date:2018-04-19
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
5ZQP
DownloadVisualize
BU of 5zqp by Molmil
Tankyrase-2 in complex with compound 12
Descriptor: 1'-(4-oxo-3,4,5,6,7,8-hexahydroquinazolin-2-yl)-2H-spiro[1-benzofuran-3,4'-piperidin]-2-one, GLYCEROL, PHOSPHATE ION, ...
Authors:Niwa, H, Shirai, F, Sato, S, Yoshimoto, N, Tsumura, T, Okue, M, Shirouzu, M, Seimiya, H, Umehara, T.
Deposit date:2018-04-19
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
5ZQQ
DownloadVisualize
BU of 5zqq by Molmil
Tankyrase-2 in complex with compound 52
Descriptor: 1-methyl-1'-(4-oxo-3,4,5,6,7,8-hexahydroquinazolin-2-yl)spiro[indole-3,4'-piperidin]-2(1H)-one, GLYCEROL, PHOSPHATE ION, ...
Authors:Niwa, H, Shirai, F, Sato, S, Yoshimoto, N, Tsumura, T, Okue, M, Shirouzu, M, Seimiya, H, Umehara, T.
Deposit date:2018-04-19
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
6KRO
DownloadVisualize
BU of 6kro by Molmil
Tankyrase-2 in complex with RK-582
Descriptor: 6-[(2S,6R)-2,6-dimethylmorpholin-4-yl]-4-fluoranyl-1-methyl-1'-(8-methyl-4-oxidanylidene-3,5,6,7-tetrahydropyrido[2,3-d]pyrimidin-2-yl)spiro[indole-3,4'-piperidine]-2-one, GLYCEROL, PHOSPHATE ION, ...
Authors:Niwa, H, Shirai, F, Sato, S, Tsumura, T, Okue, M, Shirouzu, M, Seimiya, H, Umehara, T.
Deposit date:2019-08-22
Release date:2020-04-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design and Discovery of an Orally Efficacious Spiroindolinone-Based Tankyrase Inhibitor for the Treatment of Colon Cancer.
J.Med.Chem., 63, 2020
8HVA
DownloadVisualize
BU of 8hva by Molmil
Crystal structure of EGFR_TMX in complex with covalently bound compound 14
Descriptor: Epidermal growth factor receptor, ~{N}-[6-(1-methylindol-3-yl)pyrimidin-4-yl]prop-2-enamide
Authors:Takahashi, M, Dokurno, P.
Deposit date:2022-12-26
Release date:2023-12-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:A covalent fragment-based strategy targeting a novel cysteine to inhibit activity of mutant EGFR kinase.
Rsc Med Chem, 14, 2023

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon