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1DSY

C2 DOMAIN FROM PROTEIN KINASE C (ALPHA) COMPLEXED WITH CA2+ AND PHOSPHATIDYLSERINE

Summary for 1DSY
Entry DOI10.2210/pdb1dsy/pdb
DescriptorPROTEIN KINASE C, ALPHA TYPE, CALCIUM ION, PHOSPHATE ION, ... (5 entities in total)
Functional Keywordscalcium++, phospholipid binding protein, calcium-binding protein, phosphatidylserine, protein kinase c, transferase
Biological sourceRattus norvegicus (Norway rat)
Cellular locationCytoplasm: P05696
Total number of polymer chains1
Total formula weight16871.02
Authors
Verdaguer, N.,Corbalan-Garcia, S.,Ochoa, W.F.,Fita, I.,Gomez-Fernandez, J.C. (deposition date: 2000-01-10, release date: 2000-01-26, Last modification date: 2024-02-07)
Primary citationVerdaguer, N.,Corbalan-Garcia, S.,Ochoa, W.F.,Fita, I.,Gomez-Fernandez, J.C.
Ca(2+) bridges the C2 membrane-binding domain of protein kinase Calpha directly to phosphatidylserine.
EMBO J., 18:6329-6338, 1999
Cited by
PubMed Abstract: The C2 domain acts as a membrane-targeting module in a diverse group of proteins including classical protein kinase Cs (PKCs), where it plays an essential role in activation via calcium-dependent interactions with phosphatidylserine. The three-dimensional structures of the Ca(2+)-bound forms of the PKCalpha-C2 domain both in the absence and presence of 1, 2-dicaproyl-sn-phosphatidyl-L-serine have now been determined by X-ray crystallography at 2.4 and 2.6 A resolution, respectively. In the structure of the C2 ternary complex, the glycerophosphoserine moiety of the phospholipid adopts a quasi-cyclic conformation, with the phosphoryl group directly coordinated to one of the Ca(2+) ions. Specific recognition of the phosphatidylserine is reinforced by additional hydrogen bonds and hydrophobic interactions with protein residues in the vicinity of the Ca(2+) binding region. The central feature of the PKCalpha-C2 domain structure is an eight-stranded, anti-parallel beta-barrel with a molecular topology and organization of the Ca(2+) binding region closely related to that found in PKCbeta-C2, although only two Ca(2+) ions have been located bound to the PKCalpha-C2 domain. The structural information provided by these results suggests a membrane binding mechanism of the PKCalpha-C2 domain in which calcium ions directly mediate the phosphatidylserine recognition while the calcium binding region 3 might penetrate into the phospholipid bilayer.
PubMed: 10562545
DOI: 10.1093/emboj/18.22.6329
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.6 Å)
Structure validation

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