1DSY
C2 DOMAIN FROM PROTEIN KINASE C (ALPHA) COMPLEXED WITH CA2+ AND PHOSPHATIDYLSERINE
Summary for 1DSY
| Entry DOI | 10.2210/pdb1dsy/pdb |
| Descriptor | PROTEIN KINASE C, ALPHA TYPE, CALCIUM ION, PHOSPHATE ION, ... (5 entities in total) |
| Functional Keywords | calcium++, phospholipid binding protein, calcium-binding protein, phosphatidylserine, protein kinase c, transferase |
| Biological source | Rattus norvegicus (Norway rat) |
| Cellular location | Cytoplasm: P05696 |
| Total number of polymer chains | 1 |
| Total formula weight | 16871.02 |
| Authors | Verdaguer, N.,Corbalan-Garcia, S.,Ochoa, W.F.,Fita, I.,Gomez-Fernandez, J.C. (deposition date: 2000-01-10, release date: 2000-01-26, Last modification date: 2024-02-07) |
| Primary citation | Verdaguer, N.,Corbalan-Garcia, S.,Ochoa, W.F.,Fita, I.,Gomez-Fernandez, J.C. Ca(2+) bridges the C2 membrane-binding domain of protein kinase Calpha directly to phosphatidylserine. EMBO J., 18:6329-6338, 1999 Cited by PubMed Abstract: The C2 domain acts as a membrane-targeting module in a diverse group of proteins including classical protein kinase Cs (PKCs), where it plays an essential role in activation via calcium-dependent interactions with phosphatidylserine. The three-dimensional structures of the Ca(2+)-bound forms of the PKCalpha-C2 domain both in the absence and presence of 1, 2-dicaproyl-sn-phosphatidyl-L-serine have now been determined by X-ray crystallography at 2.4 and 2.6 A resolution, respectively. In the structure of the C2 ternary complex, the glycerophosphoserine moiety of the phospholipid adopts a quasi-cyclic conformation, with the phosphoryl group directly coordinated to one of the Ca(2+) ions. Specific recognition of the phosphatidylserine is reinforced by additional hydrogen bonds and hydrophobic interactions with protein residues in the vicinity of the Ca(2+) binding region. The central feature of the PKCalpha-C2 domain structure is an eight-stranded, anti-parallel beta-barrel with a molecular topology and organization of the Ca(2+) binding region closely related to that found in PKCbeta-C2, although only two Ca(2+) ions have been located bound to the PKCalpha-C2 domain. The structural information provided by these results suggests a membrane binding mechanism of the PKCalpha-C2 domain in which calcium ions directly mediate the phosphatidylserine recognition while the calcium binding region 3 might penetrate into the phospholipid bilayer. PubMed: 10562545DOI: 10.1093/emboj/18.22.6329 PDB entries with the same primary citation |
| Experimental method | X-RAY DIFFRACTION (2.6 Å) |
Structure validation
Download full validation report






