9ZRN
Neutralizing W014 Fab antibody fragment in complex with West Nile Virus EDIII
Summary for 9ZRN
| Entry DOI | 10.2210/pdb9zrn/pdb |
| Descriptor | W014 Fab Heavy Chain, W014 Fab Light Chain, Envelope protein E, ... (4 entities in total) |
| Functional Keywords | antibody, neutralizing, west nile virus, viral protein, viral protein-immune system complex, viral protein/immune system |
| Biological source | Homo sapiens More |
| Total number of polymer chains | 3 |
| Total formula weight | 59344.30 |
| Authors | |
| Primary citation | Cervantes Rincon, T.,Frckova, T.,Contejean, Z.I.,Cantergiani, J.,Groen, K.,Cena, B.,Moro, S.G.,Bianchini, F.,Simonelli, L.,Jarrossay, D.,Tosolini, S.,Kuratli, R.,Robinson, A.R.E.,Cizkova, M.,Niejadlik, E.G.,Moritz, J.,Thakur, R.,Kratka, Z.,Mijatovic, D.,Grujic, J.,Holoubek, J.,Budakov-Obradovic, Z.,Salat, J.,Honig, V.,Vranes, M.,Lojpur, Z.,Lendak, D.,Sevic, S.,Bajci, M.,Popovic-Dragonjic, L.,Popovska Jovicic, B.,Gavrilovic, J.,Kapoor, T.,MacDonald, M.R.,Bournazos, S.,Varani, L.,Palus, M.,Hale, B.G.,Banovic, P.,Ruzek, D.,Barnes, C.O.,Robbiani, D.F. Analysis of West Nile disease convalescents identifies human monoclonal antibodies protective against West Nile and related orthoflaviviruses. Immunity, 59:2015-2029.e9, 2026 Cited by PubMed Abstract: West Nile virus (WNV) is a mosquito-borne pathogen of global concern that can cause fatal neuroinvasive disease, and no specific prophylaxis or treatment exists for infections by WNV and most related orthoflaviviruses. Here, we isolated and characterized antibodies from WNV convalescent individuals and report that neutralizing autoantibodies against type I interferons did not impair antiviral antibody development. Among the monoclonal antibodies with potent neutralizing activity against WNV that were identified, W010 targeted a distinct epitope within the envelope protein domain III (EDIII) and conferred both pre- and post-exposure protection in a murine WNV model, even when interferon signaling was impaired. A second protective antibody, W014, exhibited broad cross-neutralization of other pathogenic orthoflavivirus members, including Japanese encephalitis virus, Murray Valley encephalitis virus, Saint Louis encephalitis virus, and Usutu virus. These findings identify key neutralizing epitopes on WNV EDIII and provide candidates for the development of antibody-based interventions against encephalitic orthoflavivirus infections. PubMed: 42330958DOI: 10.1016/j.immuni.2026.05.013 PDB entries with the same primary citation |
| Experimental method | X-RAY DIFFRACTION (2.1 Å) |
Structure validation
Download full validation report
