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9UED

Cryo-EM structure of human TRPV3 in complex with sevoflurane determined in MSP2N2 nanodisc

This is a non-PDB format compatible entry.
Summary for 9UED
Entry DOI10.2210/pdb9ued/pdb
EMDB information64082
DescriptorTransient receptor potential cation channel subfamily V member 3, sevoflurane, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (3 entities in total)
Functional Keywordstransient receptor potential vanilloid 3, membrane protein
Biological sourceHomo sapiens (human)
Total number of polymer chains4
Total formula weight374721.42
Authors
Lu, X.,Yao, J. (deposition date: 2025-04-08, release date: 2026-04-08, Last modification date: 2026-06-10)
Primary citationWang, P.,Zhu, J.,Lu, X.,Chen, C.,Gao, B.,Tao, W.,Xia, K.,Song, Y.,Shi, Q.,Gai, H.,Xiao, P.,Liu, F.,Pang, P.,Li, Y.,Mo, X.,Wang, X.D.,Xie, C.,Li, D.,Zhang, Z.,Yao, J.
Vagal nerve TRPV3 regulates sedative-mediated appeasement.
Proc.Natl.Acad.Sci.USA, 123:e2525757123-e2525757123, 2026
Cited by
PubMed Abstract: Aromatic essential oils (EOs) exhibit anxiolytic properties, yet their neural and molecular mechanisms remain to be understood. Here, we found that citronellal, an EO derived from lemongrass, alleviates stress-related anxiety by modulating vagal tone. We identified transient receptor potential vanilloid 3 (TRPV3) channel in nodose ganglion (NG) as the molecular target of citronellal. TRPV3 was also observed to mediate the antistress effects of the inhaled anesthetic sevoflurane. Both sedatives attenuated acute restraint stress-induced hyperactivity of heart and breath rates via glutamatergic neurotransmission along NG-to-caudal nucleus tractus solitarius (cNTS) pathway. This effect was abolished by surgical vagotomy, , or NG-specific knockdown. Cryo-EM structural analysis revealed that sevoflurane occupies a pore-proximal fenestration site, while citronellal binds to the vanilloid site. Re-expression of wild-type TRPV3, but not loss-of-function TRPV3 mutants TRPV3(A560L) or TRPV3(V662A), in NG neurons restored the mouse's response to both sedatives, thereby modulating heart and respiratory rates. Together, these findings establish peripheral TRPV3 as a multisensory ligand-gated node for vagal modulation of stress responses, and help instruct pathway-specific anxiolytics.
PubMed: 41989856
DOI: 10.1073/pnas.2525757123
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.29 Å)
Structure validation

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