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9TB5

Crystal structure of the MpPYL1-ABA-HAB1 ternary complex

Summary for 9TB5
Entry DOI10.2210/pdb9tb5/pdb
DescriptorMpPYL1 receptor, Protein phosphatase 2C 16, (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ... (6 entities in total)
Functional Keywordsaba receptor, inhibitory ternary complex, plant protein
Biological sourceMarchantia polymorpha (common liverwort)
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Total number of polymer chains2
Total formula weight58866.33
Authors
Rivera-Moreno, M.,Infantes, L.,Albert, A. (deposition date: 2025-11-19, release date: 2026-05-06)
Primary citationRivera-Moreno, M.,Bono, M.,Infantes, L.,Rodriguez, P.L.,Albert, A.
Evolutionary-based remodeling of ABA receptors reveals the structural basis of hormone perception and regulation.
Proc.Natl.Acad.Sci.USA, 123:e2534140123-e2534140123, 2026
Cited by
PubMed Abstract: Drought limits crop productivity, and effective mitigation requires a mechanistic understanding of how abscisic acid (ABA) perception translates hormone levels into physiological responses. In seed plants, ABA is sensed by PYR/PYL/RCAR (PYR/PYL) receptors, which inhibit 2C protein phosphatases (PP2Cs), thereby releasing Snf1-related protein kinases and driving stomatal closure and stress-responsive transcription. Yet how receptor architecture evolved to tune ABA dependence and dynamic range remains unclear. Here, we combine structural biology, biochemistry, evolutionary analysis, and in planta assays across algal, bryophyte, and angiosperm receptors to uncover a minimal molecular code that governs ABA sensitivity and oligomeric state. We identify a five-residue signature: Three leucines in the ligand pocket stabilize the gate in a closed conformation, conferring ligand-independent PP2C inhibition (ancestral trait), while two interface residues toggle dimerization (Leu/Lys) versus monomerization (Cys/Ser), thereby setting ABA affinity. Structure-guided swaps reciprocally convert behaviors: Introducing the three leucines plus interface substitutions renders the ABA-dependent dimeric CsPYL1 into a monomer-like with ABA-independent activity, whereas the converse changes in monomeric MpPYL1 enforce dimerization and lower ABA affinity. In planta, reporter assays and mutant analyses reveal complementary operating ranges: Monomeric, high-affinity receptors decode low ABA under mild stress, while dimeric, reduced-affinity receptors sustain signaling at high ABA during acute drought, expanding the system's overall dynamic range and robustness. These results resolve the apparent paradox of low-affinity dimers as an evolutionary innovation rather than a loss of sensitivity, link receptor architecture to ABA-mediated response, and provide actionable design principles for engineering ABA signaling to enhance crop drought resilience.
PubMed: 41984838
DOI: 10.1073/pnas.2534140123
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.98 Å)
Structure validation

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