9SZW

Human carboxyhemoglobin bound to full-length Staphylococcus aureus IsdH - IsdH:Hbdim complex

Summary for 9SZW

• Entry DOI: 10.2210/pdb9szw/pdb
• EMDB information: 55389
• Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, Iron-regulated surface determinant protein H, ... (4 entities in total)
• Functional Keywords: iron acquisition, hemophore, hemoglobin, neat domain, metal transport
• Biological source: Staphylococcus aureus; More
• Total number of polymer chains: 3
• Total formula weight: 102430.04

Authors

Buoli Comani, V.,De Bei, O.,Luisi, B.F.,Bettati, S. (deposition date: 2025-10-16, release date: 2026-05-13, Last modification date: 2026-05-20)

Primary citation

Comani, V.B.,De Bei, O.,Paris, G.,Marchetti, M.,Pancrazi, F.,Campanini, B.,Ronda, L.,Luisi, B.F.,Faggiano, S.,Bizzarri, A.R.,Bettati, S.
Refining the mechanism of heme acquisition from free hemoglobin by Staphylococcus aureus IsdH.
Proc.Natl.Acad.Sci.USA, 123:-, 2026

PubMed Abstract: is a human pathogen whose virulence depends on iron acquisition. The bacterium expresses the hemophores IsdB and IsdH that enable heme capture from host hemoglobin (Hb). Unlike IsdB, IsdH can bind both free Hb and Hb:haptoglobin (Hb:Hp) complexes. Here, we present a comprehensive structural analysis of full-length IsdH in complex with free Hb, overcoming the limitations of previous studies based on truncated IsdH constructs. Cryo-EM revealed a previously unobserved oligomeric state and a unique binding pose of the N-terminal Hb-binding domain, likely representing the initial step of Hb engagement. Time-resolved and single-molecule force spectroscopy experiments delineated the sequential steps and mechanical aspects of Hb binding and heme extraction. Together, these findings provide an integrated structural and functional view of the IsdH-Hb interaction in the absence of Hp, as may occur during hemolysis, and offer insights into heme scavenging and potential avenues for therapeutic inhibition.

PubMed: 42113987
DOI: 10.1073/pnas.2601134123

Experimental method

ELECTRON MICROSCOPY (3.14 Å)