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9SDA

Cryo-EM structure of the 70S ribosome from Francisella tularensis bound to a hibernation-promoting factor

This is a non-PDB format compatible entry.
Summary for 9SDA
Entry DOI10.2210/pdb9sda/pdb
EMDB information54782
DescriptorChains: A, Large ribosomal subunit protein uL14, Large ribosomal subunit protein uL15, ... (55 entities in total)
Functional Keywordscryo-em structure of the 70s ribosome from francisella tularensis bound to a hibernation-promoting factor from hpf/yfia family, ribosome
Biological sourceFrancisella tularensis
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Total number of polymer chains53
Total formula weight2137673.64
Authors
Klima, M.,Silhan, J.,Boura, E. (deposition date: 2025-08-13, release date: 2026-05-06)
Primary citationKlima, M.,Silhan, J.,Pavlik, P.,Hercik, K.,Boura, E.
Structure of the hibernating Francisella tularensis ribosome and mechanistic insights into its inhibition by antibiotics.
Nucleic Acids Res., 54:-, 2026
Cited by
PubMed Abstract: Francisella tularensis is the causative agent of tularemia, a zoonotic disease named after the Tulare County, California. Symptoms include sudden fever, chills, fatigue, and swollen lymph nodes, among others, and without treatment it is very serious or even fatal. In addition, F. tularensis is considered a potential bioterrorism threat due to its high infectivity and lethality. Ribosomes are key targets for many classes of antibiotics. In this study, we examined the F. tularensis ribosome and determined its structure at 2.5Å resolution using cryo-electron microscopy. Notably, we observed the stress-induced ribosome-associated inhibitor A (RaiA) protein bound to the ribosome. RaiA functions as a molecular hibernation factor, inhibiting bacterial translation in response to stress or nutrient deprivation. This mechanism parallels that described in the model organism Escherichia coli and in several pathogenic bacteria, such as Staphylococcus aureus. Furthermore, we solved structures of the antibiotics chloramphenicol and gentamicin bound to the F. tularensis ribosome. Collectively, these results provide structural insights that highlight previously unexplored opportunities for therapeutic intervention.
PubMed: 42049235
DOI: 10.1093/nar/gkag340
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.39 Å)
Structure validation

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PDB entries from 2026-05-06

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