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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9SDA

Cryo-EM structure of the 70S ribosome from Francisella tularensis bound to a hibernation-promoting factor

This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtakgvrrk.DGskvrFdgNaaVL
ChainResidueDetails
JALA60-LEU86
site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVKLAeghdinfV
ChainResidueDetails
SLYS81-VAL96
site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SqVvakFVnhimlsGKKsiaekIVygA
ChainResidueDetails
gSER20-ALA46
site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GvaIVSTSkGLVsdrkAR
ChainResidueDetails
hGLY102-ARG119
site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALn.AkNLkVtsitDvTPlPHN
ChainResidueDetails
kILE97-ASN119
site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
lLYS43-ARG50
site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.VnkLkaYINEt.GKIvpsRV
ChainResidueDetails
rILE17-VAL40
site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGQqhvpvlMteemVGhkLGEFvvT
ChainResidueDetails
sASN53-THR77
site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LtaIAGQkpVvTkSKkS
ChainResidueDetails
FLEU57-SER73
site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGttGQagAirlGvTRAL
ChainResidueDetails
iGLY68-LEU86
site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LkgHFeahKkDnhSrrgLlrLvsqrrkLldY
ChainResidueDetails
oLEU38-TYR68
site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KrfEaRAkGRgnrilkrtSHITVkV
ChainResidueDetails
RLYS83-VAL107
site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGVAmNPvD
ChainResidueDetails
CPRO219-ASP230
site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FeagqkvDvrGvSkGKGfqGgvkR
ChainResidueDetails
DPHE102-ARG125
site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVIAsGeIqka..VsLkgiaCTkgAkeaIekaG
ChainResidueDetails
KLYS109-GLY139
site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
ChainResidueDetails
GPRO155-VAL163
site_idPS00527
Number of Residues24
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. RrCkvtgrphavyrkFGLCRnKLR
ChainResidueDetails
nARG62-ARG85
site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARsewardGrVplQt..FradVDyataealTtyGviG
ChainResidueDetails
cALA163-GLY197
site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. KNHLFKsAKRDIARI
ChainResidueDetails
XLYS43-ILE57
site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkkemPnkMEikKYD
ChainResidueDetails
1TYR17-ASP36
site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRimsFaAltVVGDgk.GrIGvGrgksr.EVpa.AI
ChainResidueDetails
eGLY28-ILE60
site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRgGKIWIRIFP
ChainResidueDetails
LLYS59-PRO70
site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRmgfAaTraeARqLV
ChainResidueDetails
dLEU94-VAL118
site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGrRHrrSlpVRGQ
ChainResidueDetails
mARG87-GLN100
site_idPS00651
Number of Residues28
DetailsRIBOSOMAL_L9 Ribosomal protein L9 signature. GvlGdivnVkpGYarNFLipfgkAvqaT
ChainResidueDetails
HGLY13-THR40
site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGsveyW
ChainResidueDetails
LARG82-TRP93
site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPrtpl.GRtmfkkLkVYaG
ChainResidueDetails
IVAL105-GLY127
site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsnlkRkrth.GFraR
ChainResidueDetails
2LYS2-ARG21
site_idPS00828
Number of Residues26
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkvIkRnrvVrViCtdp.RHkQrQ
ChainResidueDetails
4CYS11-GLN36
site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GtIIiRQRGtkthpG
ChainResidueDetails
VGLY34-GLY48
site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTKsGAaKRFkktgkggfkhrcanr.AH
ChainResidueDetails
3LYS5-HIS31
site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrtfRsLWIVRINaaaR
ChainResidueDetails
PLYS54-ARG70
site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MkEMLSAGVHFG
ChainResidueDetails
bMET4-GLY15
site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VeKrADVR.RAKLYYMR
ChainResidueDetails
OVAL87-ARG102
site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. GDdViVIaGkdKGrr.GvV
ChainResidueDetails
TGLY7-VAL24
site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. DIcsecHPFYTgkqrivdta....GR
ChainResidueDetails
ZASP36-ARG57
site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrtivEpLVTlAK
ChainResidueDetails
MILE34-LYS56
site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. VkimKfrrRKhsmkqqGHRQyfT
ChainResidueDetails
QVAL73-THR95
site_idPS01181
Number of Residues13
DetailsRIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK
ChainResidueDetails
uASP13-LYS25
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsModified residue: {"description":"N5-methylglutamine","evidences":[{"source":"HAMAP-Rule","id":"MF_01325","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues124
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues10
DetailsCompositional bias: {"description":"Gly residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00501","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues24
DetailsCompositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues20
DetailsCompositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues68
DetailsDomain: {"description":"KH type-2","evidences":[{"source":"HAMAP-Rule","id":"MF_01309","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues62
DetailsDomain: {"description":"S4 RNA-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_01306","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues63
DetailsDomain: {"description":"S5 DRBM","evidences":[{"source":"HAMAP-Rule","id":"MF_01307","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues1
DetailsModified residue: {"description":"3-methylthioaspartic acid","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

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PDB entries from 2026-05-13

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