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9QVT

Crystal structure of STING CTD in complex with potent agonist D5

This is a non-PDB format compatible entry.
Summary for 9QVT
Entry DOI10.2210/pdb9qvt/pdb
DescriptorStimulator of interferon genes protein, 4-[6-methoxy-5-[[6-methoxy-2-(4-oxidanyl-4-oxidanylidene-butanoyl)-1-benzothiophen-5-yl]sulfanylmethylsulfanyl]-1-benzothiophen-2-yl]-4-oxidanylidene-butanoic acid (3 entities in total)
Functional Keywordssting, immune system, cgas, agonist, interferon, signalling, signaling protein
Biological sourceHomo sapiens (human)
Total number of polymer chains1
Total formula weight27759.30
Authors
dos Reis, C.V.,Hsu, N.-S.,Rooney, T.,Skidmore, J.,Bernardes, G.J.L.,Hyvonen, M. (deposition date: 2025-04-11, release date: 2025-09-24, Last modification date: 2025-12-10)
Primary citationHsu, N.S.,Tang, C.,Mendes, R.V.,Labao-Almeida, C.,Dos Reis, C.V.,Coelho, A.R.,Marques, M.C.,Cabeza Cabrerizo, M.,Misteli, R.,Rooney, T.P.C.,Hyvonen, M.,Corzana, F.,Fior, R.,Bernardes, G.J.L.
Tumour-specific STING agonist synthesis via a two-component prodrug system.
Nat.Chem., 17:1941-1951, 2025
Cited by
PubMed Abstract: Pharmacological activation of STING holds promise in cancer treatment. A recent trend is the development of tumour-specific or conditionally activated STING agonists for enhanced safety and efficacy. Here we explore an unconventional prodrug activation strategy for on-tumour synthesis of a potent agonist. Leveraging the unique mechanism of MSA2, a small-molecule agonist that dimerizes non-covalently before binding to STING, we showed that its analogues bearing reactive functional groups readily and selectively form covalent dimers under mild conditions and in complex environments. We identified a reacting pair that led to a thioether-linked dimer with submicromolar potency in cell-based assays. Caging one of the reactants with a self-immolative β-glucuronide moiety resulted in a two-component prodrug system that near-exclusively formed the active compounds in tumours overexpressing β-glucuronidase. These results exemplify the use of small-molecule recognition for on-site generation of active compounds from benign precursors.
PubMed: 40957952
DOI: 10.1038/s41557-025-01930-9
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.305 Å)
Structure validation

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