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9Q31

RIP1 kinase domain in complex with GDC-8264

This is a non-PDB format compatible entry.
Summary for 9Q31
Entry DOI10.2210/pdb9q31/pdb
DescriptorReceptor-interacting serine/threonine-protein kinase 1, cyclopropyl[(4R,5S,7S)-7-fluoro-5-phenyl-6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazol-2-yl]methanone, BROMIDE ION, ... (7 entities in total)
Functional Keywordskinase, inhibitor, transferase, transferase-inhibitor complex, transferase/inhibitor
Biological sourceHomo sapiens (human)
Total number of polymer chains2
Total formula weight68445.27
Authors
Lupardus, P.,Fong, R.,Demircioglu, F.E. (deposition date: 2025-08-15, release date: 2025-11-12, Last modification date: 2025-11-26)
Primary citationPatel, S.,Chen, H.,Varfolomeev, E.,Kwon, Y.,Ramaswamy, S.,Kohli, P.B.,Quinn, J.G.,Webster, J.D.,Mao, J.,Chen, Y.,Fong, R.,Demircioglu, F.E.,Lupardus, P.,Stivala, C.,Hamilton, G.L.,Siu, M.,Sujatha-Bhaskar, S.,Mohanan, V.,Adedeji, A.O.,Santagostino, S.F.,Maher, J.,McKenzie, B.,Rothenberg, M.E.,Johnson, A.,Vucic, D.
Discovery of Clinical Candidate GDC-8264, a Novel, Potent and Selective RIP1 Inhibitor for Amelioration of Tissue Damage and the Treatment of Inflammatory Diseases.
J.Med.Chem., 68:23050-23077, 2025
Cited by
PubMed Abstract: Receptor-interacting protein 1 (RIP1) is a critical regulator of inflammatory cell death induced by diverse stimuli including TNF family ligands and ischemic injury. As such, the inhibition of RIP1 with small molecule kinase inhibitors is predicted to ameliorate tissue damage and associated inflammation. A novel ketone class of RIP1 inhibitors was identified via a high-throughput screen followed by structure-based scaffold hopping. Subsequent optimization yielded clinical molecule (compound ), which has excellent target selectivity and druglike attributes for once-daily oral dosing. is currently being tested in a Phase 2 trial for the prevention of cardiac surgery-associated acute kidney injury (CSA-AKI) in hopes of providing benefit for patients requiring cardio-pulmonary bypass at medium to high risk of developing CSA-AKI.
PubMed: 41165210
DOI: 10.1021/acs.jmedchem.5c01891
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.05 Å)
Structure validation

246905

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