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9PGG

Cryo-EM structure of bacteriophage P22 gp1-gp5-gp4 complex at 2.76 angstrom

This is a non-PDB format compatible entry.
Summary for 9PGG
Entry DOI10.2210/pdb9pgg/pdb
EMDB information71631
DescriptorMajor capsid protein, Peptidoglycan hydrolase gp4, Portal protein (3 entities in total)
Functional Keywordsphage capsid-tail interface, viral protein
Biological sourceSalmonella phage P22
More
Total number of polymer chains39
Total formula weight1912426.20
Authors
Yu, H.,Liu, J.,Molienux, I.J. (deposition date: 2025-07-07, release date: 2026-02-04)
Primary citationWang, C.,Yu, H.,Park, T.,Molineux, I.J.,Liu, J.
Structural basis for bacteriophage P22 assembly and infection initiation.
J.Mol.Biol., :169647-169647, 2026
Cited by
PubMed Abstract: Salmonella phage P22 deploys a highly coordinated tail machine to recognize its host and initiate infection. Here, we present a cryo-EM structure of wild-type P22 that defines both how the tail apparatus assembles onto the capsid and how they interface. Flexible loop residues on both the portal protein gp1 and the capsid protein gp5 undergo pronounced positional shifts and engage multiple partners to accommodate the C12-C5 symmetry mismatch at the portal-capsid interface. The portal protein gp1 forms a distinctive ∼15-nm barrel that projects deep into the capsid interior. Comparison with a mutant lacking the three internal E (ejection) proteins indicates that these proteins reside within the portal-tail lumen in a poorly ordered state, yet are essential for stabilizing the extended portal barrel. We further show how the hub protein gp10 orchestrates the assembly of four distinct particle isomers through its coordinated interactions with portal gp1, adaptor gp4, tailspike gp9, and needle gp26. Finally, cryo-electron tomography reveals that the gp10 hub acts as a structural foundation for the assembly of one E protein into an extracellular channel that breaches the cell surface, with other E proteins forming a genome-translocating trans-envelope conduit.
PubMed: 41565001
DOI: 10.1016/j.jmb.2026.169647
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.76 Å)
Structure validation

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PDB entries from 2026-02-04

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