9PGG

Cryo-EM structure of bacteriophage P22 gp1-gp5-gp4 complex at 2.76 angstrom

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
Aa	0019028	cellular_component	viral capsid
Aa	0039620	cellular_component	T=7 icosahedral viral capsid
Aa	0042802	molecular_function	identical protein binding
Aa	0046729	cellular_component	viral procapsid
Aa	0046797	biological_process	viral procapsid maturation
Ab	0019028	cellular_component	viral capsid
Ab	0039620	cellular_component	T=7 icosahedral viral capsid
Ab	0042802	molecular_function	identical protein binding
Ab	0046729	cellular_component	viral procapsid
Ab	0046797	biological_process	viral procapsid maturation
Ac	0019028	cellular_component	viral capsid
Ac	0039620	cellular_component	T=7 icosahedral viral capsid
Ac	0042802	molecular_function	identical protein binding
Ac	0046729	cellular_component	viral procapsid
Ac	0046797	biological_process	viral procapsid maturation
Ad	0019028	cellular_component	viral capsid
Ad	0039620	cellular_component	T=7 icosahedral viral capsid
Ad	0042802	molecular_function	identical protein binding
Ad	0046729	cellular_component	viral procapsid
Ad	0046797	biological_process	viral procapsid maturation
Ae	0019028	cellular_component	viral capsid
Ae	0039620	cellular_component	T=7 icosahedral viral capsid
Ae	0042802	molecular_function	identical protein binding
Ae	0046729	cellular_component	viral procapsid
Ae	0046797	biological_process	viral procapsid maturation
Af	0019028	cellular_component	viral capsid
Af	0039620	cellular_component	T=7 icosahedral viral capsid
Af	0042802	molecular_function	identical protein binding
Af	0046729	cellular_component	viral procapsid
Af	0046797	biological_process	viral procapsid maturation
Ag	0019028	cellular_component	viral capsid
Ag	0039620	cellular_component	T=7 icosahedral viral capsid
Ag	0042802	molecular_function	identical protein binding
Ag	0046729	cellular_component	viral procapsid
Ag	0046797	biological_process	viral procapsid maturation
Ah	0019028	cellular_component	viral capsid
Ah	0039620	cellular_component	T=7 icosahedral viral capsid
Ah	0042802	molecular_function	identical protein binding
Ah	0046729	cellular_component	viral procapsid
Ah	0046797	biological_process	viral procapsid maturation
Ai	0019028	cellular_component	viral capsid
Ai	0039620	cellular_component	T=7 icosahedral viral capsid
Ai	0042802	molecular_function	identical protein binding
Ai	0046729	cellular_component	viral procapsid
Ai	0046797	biological_process	viral procapsid maturation
Aj	0019028	cellular_component	viral capsid
Aj	0039620	cellular_component	T=7 icosahedral viral capsid
Aj	0042802	molecular_function	identical protein binding
Aj	0046729	cellular_component	viral procapsid
Aj	0046797	biological_process	viral procapsid maturation
Ak	0019028	cellular_component	viral capsid
Ak	0039620	cellular_component	T=7 icosahedral viral capsid
Ak	0042802	molecular_function	identical protein binding
Ak	0046729	cellular_component	viral procapsid
Ak	0046797	biological_process	viral procapsid maturation
Al	0019028	cellular_component	viral capsid
Al	0039620	cellular_component	T=7 icosahedral viral capsid
Al	0042802	molecular_function	identical protein binding
Al	0046729	cellular_component	viral procapsid
Al	0046797	biological_process	viral procapsid maturation
Am	0019028	cellular_component	viral capsid
Am	0039620	cellular_component	T=7 icosahedral viral capsid
Am	0042802	molecular_function	identical protein binding
Am	0046729	cellular_component	viral procapsid
Am	0046797	biological_process	viral procapsid maturation
An	0019028	cellular_component	viral capsid
An	0039620	cellular_component	T=7 icosahedral viral capsid
An	0042802	molecular_function	identical protein binding
An	0046729	cellular_component	viral procapsid
An	0046797	biological_process	viral procapsid maturation
Ao	0019028	cellular_component	viral capsid
Ao	0039620	cellular_component	T=7 icosahedral viral capsid
Ao	0042802	molecular_function	identical protein binding
Ao	0046729	cellular_component	viral procapsid
Ao	0046797	biological_process	viral procapsid maturation
Ap	0016787	molecular_function	hydrolase activity
Ap	0046718	biological_process	symbiont entry into host cell
Ap	0098015	cellular_component	virus tail
Ap	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Ap	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Ap	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Aq	0016787	molecular_function	hydrolase activity
Aq	0046718	biological_process	symbiont entry into host cell
Aq	0098015	cellular_component	virus tail
Aq	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Aq	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Aq	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Ar	0016787	molecular_function	hydrolase activity
Ar	0046718	biological_process	symbiont entry into host cell
Ar	0098015	cellular_component	virus tail
Ar	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Ar	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Ar	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
As	0016787	molecular_function	hydrolase activity
As	0046718	biological_process	symbiont entry into host cell
As	0098015	cellular_component	virus tail
As	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
As	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
As	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
At	0016787	molecular_function	hydrolase activity
At	0046718	biological_process	symbiont entry into host cell
At	0098015	cellular_component	virus tail
At	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
At	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
At	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Au	0016787	molecular_function	hydrolase activity
Au	0046718	biological_process	symbiont entry into host cell
Au	0098015	cellular_component	virus tail
Au	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Au	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Au	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Av	0016787	molecular_function	hydrolase activity
Av	0046718	biological_process	symbiont entry into host cell
Av	0098015	cellular_component	virus tail
Av	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Av	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Av	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Aw	0016787	molecular_function	hydrolase activity
Aw	0046718	biological_process	symbiont entry into host cell
Aw	0098015	cellular_component	virus tail
Aw	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Aw	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Aw	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Ax	0016787	molecular_function	hydrolase activity
Ax	0046718	biological_process	symbiont entry into host cell
Ax	0098015	cellular_component	virus tail
Ax	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Ax	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Ax	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Ay	0016787	molecular_function	hydrolase activity
Ay	0046718	biological_process	symbiont entry into host cell
Ay	0098015	cellular_component	virus tail
Ay	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Ay	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Ay	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Az	0016787	molecular_function	hydrolase activity
Az	0046718	biological_process	symbiont entry into host cell
Az	0098015	cellular_component	virus tail
Az	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Az	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Az	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Ba	0016787	molecular_function	hydrolase activity
Ba	0046718	biological_process	symbiont entry into host cell
Ba	0098015	cellular_component	virus tail
Ba	0098932	biological_process	symbiont entry into host cell via disruption of host cell wall peptidoglycan
Ba	0098994	biological_process	symbiont entry into host cell via disruption of host cell envelope
Ba	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bb	0019028	cellular_component	viral capsid
Bb	0019068	biological_process	virion assembly
Bb	0019073	biological_process	viral DNA genome packaging
Bb	0046718	biological_process	symbiont entry into host cell
Bb	0046798	cellular_component	viral portal complex
Bb	0098006	biological_process	viral DNA genome packaging, headful
Bb	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bd	0019028	cellular_component	viral capsid
Bd	0019068	biological_process	virion assembly
Bd	0019073	biological_process	viral DNA genome packaging
Bd	0046718	biological_process	symbiont entry into host cell
Bd	0046798	cellular_component	viral portal complex
Bd	0098006	biological_process	viral DNA genome packaging, headful
Bd	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bf	0019028	cellular_component	viral capsid
Bf	0019068	biological_process	virion assembly
Bf	0019073	biological_process	viral DNA genome packaging
Bf	0046718	biological_process	symbiont entry into host cell
Bf	0046798	cellular_component	viral portal complex
Bf	0098006	biological_process	viral DNA genome packaging, headful
Bf	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bh	0019028	cellular_component	viral capsid
Bh	0019068	biological_process	virion assembly
Bh	0019073	biological_process	viral DNA genome packaging
Bh	0046718	biological_process	symbiont entry into host cell
Bh	0046798	cellular_component	viral portal complex
Bh	0098006	biological_process	viral DNA genome packaging, headful
Bh	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bj	0019028	cellular_component	viral capsid
Bj	0019068	biological_process	virion assembly
Bj	0019073	biological_process	viral DNA genome packaging
Bj	0046718	biological_process	symbiont entry into host cell
Bj	0046798	cellular_component	viral portal complex
Bj	0098006	biological_process	viral DNA genome packaging, headful
Bj	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bl	0019028	cellular_component	viral capsid
Bl	0019068	biological_process	virion assembly
Bl	0019073	biological_process	viral DNA genome packaging
Bl	0046718	biological_process	symbiont entry into host cell
Bl	0046798	cellular_component	viral portal complex
Bl	0098006	biological_process	viral DNA genome packaging, headful
Bl	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bn	0019028	cellular_component	viral capsid
Bn	0019068	biological_process	virion assembly
Bn	0019073	biological_process	viral DNA genome packaging
Bn	0046718	biological_process	symbiont entry into host cell
Bn	0046798	cellular_component	viral portal complex
Bn	0098006	biological_process	viral DNA genome packaging, headful
Bn	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bp	0019028	cellular_component	viral capsid
Bp	0019068	biological_process	virion assembly
Bp	0019073	biological_process	viral DNA genome packaging
Bp	0046718	biological_process	symbiont entry into host cell
Bp	0046798	cellular_component	viral portal complex
Bp	0098006	biological_process	viral DNA genome packaging, headful
Bp	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Br	0019028	cellular_component	viral capsid
Br	0019068	biological_process	virion assembly
Br	0019073	biological_process	viral DNA genome packaging
Br	0046718	biological_process	symbiont entry into host cell
Br	0046798	cellular_component	viral portal complex
Br	0098006	biological_process	viral DNA genome packaging, headful
Br	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bt	0019028	cellular_component	viral capsid
Bt	0019068	biological_process	virion assembly
Bt	0019073	biological_process	viral DNA genome packaging
Bt	0046718	biological_process	symbiont entry into host cell
Bt	0046798	cellular_component	viral portal complex
Bt	0098006	biological_process	viral DNA genome packaging, headful
Bt	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bv	0019028	cellular_component	viral capsid
Bv	0019068	biological_process	virion assembly
Bv	0019073	biological_process	viral DNA genome packaging
Bv	0046718	biological_process	symbiont entry into host cell
Bv	0046798	cellular_component	viral portal complex
Bv	0098006	biological_process	viral DNA genome packaging, headful
Bv	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism
Bx	0019028	cellular_component	viral capsid
Bx	0019068	biological_process	virion assembly
Bx	0019073	biological_process	viral DNA genome packaging
Bx	0046718	biological_process	symbiont entry into host cell
Bx	0046798	cellular_component	viral portal complex
Bx	0098006	biological_process	viral DNA genome packaging, headful
Bx	0099002	biological_process	symbiont genome ejection through host cell envelope, short tail mechanism

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	486
Details	Region: {"description":"Binding to the capsid assembly scaffolding protein","evidences":[{"source":"PubMed","id":"24600011","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	1830
Details	Region: {"description":"I domain","evidences":[{"source":"PubMed","id":"24126914","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	15
Details	Site: {"description":"Essential for binding to the capsid assembly scaffolding protein","evidences":[{"source":"PubMed","id":"24600011","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	15
Details	Site: {"description":"Involved in capsid stabilization and maturation","evidences":[{"source":"PubMed","id":"31068429","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---