9OX7
In situ microtubule structure in the axon of a human neuron
Summary for 9OX7
| Entry DOI | 10.2210/pdb9ox7/pdb |
| EMDB information | 70956 |
| Descriptor | Tubulin beta-2B chain, Tubulin alpha-1A chain, GUANOSINE-5'-DIPHOSPHATE, ... (6 entities in total) |
| Functional Keywords | human in-situ microtubule, axon, cytoskeleton, structural protein |
| Biological source | Homo sapiens (human) More |
| Total number of polymer chains | 8 |
| Total formula weight | 404716.06 |
| Authors | Zehr, E.A.,Sun, S.,Roll-Mecak, A. (deposition date: 2025-06-03, release date: 2026-03-18, Last modification date: 2026-05-06) |
| Primary citation | Zehr, E.A.,Sun, S.,Sarbanes, S.L.,Roll-Mecak, A. Microtubules in the axon are GDP bound but adopt a stable GTP-like expanded state. Nat.Struct.Mol.Biol., 33:631-640, 2026 Cited by PubMed Abstract: Microtubules scaffold cells, supporting signaling and cargo transport. They assemble from GTP-tubulin, which hydrolyzes to GDP-tubulin during polymerization. GTP-microtubule lattices are stable; GDP lattices depolymerize rapidly. In vitro, hydrolysis triggers lattice compaction. Lattice spacing regulates motors and microtubule-associated proteins; however, the conformation of tubulin in microtubules in cells is unknown. Here, we present the atomic-resolution cryo-electron microscopy structure of human microtubules in situ, in the axons of human cortical neurons derived from induced pluripotent stem cells (iPS cells). Our 2.7-Å-resolution reconstruction delineates bound water molecules and reveals that axonal microtubules adopt an expanded GTP-like lattice, despite being GDP bound. Using cryo-electron tomography and power spectrum analysis, we find that, unlike in axons, microtubules in undifferentiated iPS cells are compacted. Therefore, lattice expansion is part of neuronal differentiation. Our work provides molecular insights into neurogenesis and has implications for understanding microtubule stability and effector recruitment in neurons. PubMed: 41951886DOI: 10.1038/s41594-026-01787-7 PDB entries with the same primary citation |
| Experimental method | ELECTRON MICROSCOPY (2.69 Å) |
Structure validation
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