9N2D

Cryo-EM structure of an extended F. johnsoniae BAM complex, composite map

This is a non-PDB format compatible entry.

Summary for 9N2D

• Entry DOI: 10.2210/pdb9n2d/pdb
• EMDB information: 48835
• Descriptor: DNA uptake lipoprotein-like protein, (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, PHOSPHATIDYLETHANOLAMINE, ... (15 entities in total)
• Functional Keywords: bam complex, bama, bamd, bamf, bamg, bamm, bamp, outer-membrane proteins, omp, membrane protein
• Biological source: Flavobacterium johnsoniae UW101; More
• Total number of polymer chains: 6
• Total formula weight: 312236.03

Authors

Deme, J.C.,Lea, S.M. (deposition date: 2025-01-28, release date: 2025-07-09)

• Primary citation: Liu, X.,Orenday Tapia, L.,Deme, J.C.,Lea, S.M.,Berks, B.C.; An extended BAM complex in the Bacteroidota; To Be Published,

Experimental method

ELECTRON MICROSCOPY (2.7 Å)