9N2D
Cryo-EM structure of an extended F. johnsoniae BAM complex, composite map
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (F) | DNA uptake lipoprotein-like protein | polymer | 264 | 30219.4 | 1 | UniProt (A5FE81) | Flavobacterium johnsoniae UW101 | |
| 2 | B (A) | Surface antigen (D15) | polymer | 900 | 101490.3 | 1 | UniProt (A5FJ90) | Flavobacterium johnsoniae UW101 | |
| 3 | C (C) | Hypothetical lipoprotein | polymer | 517 | 57094.2 | 1 | UniProt (A5FLQ8) | Flavobacterium johnsoniae UW101 | |
| 4 | D (B) | Long-chain fatty acid transport protein | polymer | 409 | 44459.0 | 1 | UniProt (A5FK27) | Flavobacterium johnsoniae UW101 | |
| 5 | E (D) | Hypothetical lipoprotein | polymer | 388 | 43899.3 | 1 | UniProt (A5FNX9) | Flavobacterium johnsoniae UW101 | |
| 6 | F (E) | CarboxypepD_reg-like domain-containing protein | polymer | 249 | 28413.7 | 1 | UniProt (A5FJ21) | Flavobacterium johnsoniae UW101 | |
| 7 | G (J) | alpha-D-glucopyranuronic acid-(1-2)-[alpha-D-mannopyranose-(1-4)]beta-D-galactopyranose | branched | 518.4 | 1 | In PDB | |||
| 8 | H (G) | alpha-D-glucopyranuronic acid-(1-2)-beta-D-galactopyranose | branched | 356.3 | 1 | In PDB | |||
| 9 | I (A) | DIACYL GLYCEROL | non-polymer | 625.0 | 1 | Chemie (DGA) | |||
| 10 | J (A) | (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid | non-polymer | 2975.2 | 1 | Chemie (JSG) | |||
| 11 | K, L (A) | PHOSPHATIDYLETHANOLAMINE | non-polymer | 734.0 | 2 | Chemie (PTY) | |||
| 12 | M (C) | alpha-D-mannopyranose | non-polymer | 180.2 | 1 | Chemie (MAN) | |||
| 13 | N (C) | PALMITIC ACID | non-polymer | 256.4 | 1 | Chemie (PLM) | |||
| 14 | O, P, Q, R, S... (D) | CALCIUM ION | non-polymer | 40.1 | 7 | Chemie (CA) | |||
| 15 | V, W, X, Y (A, C, B, D) | water | water | 18.0 | 16 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 305575.9 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 874.7 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 5785.4 | |
| All* | Total formula weight | 312236.0 |
