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9MZY

Crystal structure of human RIPK1 with Compound 22

This is a non-PDB format compatible entry.
Summary for 9MZY
Entry DOI10.2210/pdb9mzy/pdb
DescriptorReceptor-interacting serine/threonine-protein kinase 1, 1-[(2S,5S)-2,3-dihydro-2,5-methano-1,4-benzoxazepin-4(5H)-yl]-3,3-difluoro-2,2-dimethylpropan-1-one, IODIDE ION, ... (6 entities in total)
Functional Keywordskinase, serine/threonine-protein kinase, inhibitor, transferase, transferase-inhibitor complex, transferase/inhibitor
Biological sourceHomo sapiens (human)
Total number of polymer chains2
Total formula weight66512.29
Authors
Palte, R.L.,Lesburg, C.A.,Maskos, K.,Thomsen, M.,Lammens, A. (deposition date: 2025-01-23, release date: 2025-05-28)
Primary citationChen, J.L.,Methot, J.L.,Mitcheltree, M.J.,Musacchio, A.,Corcoran, E.B.,Feng, G.,Lammens, A.,Maskos, K.,Palte, R.L.,Rickard, M.M.,Otte, K.M.,Mansueto, M.S.,Venkat, S.,Sondey, C.,Thomsen, M.,Lesburg, C.A.,Fradera, X.,Fell, M.J.,DiMauro, E.F.,Siliphaivanh, P.
The Discovery of Bridged Benzoazepine Amides as Selective Allosteric Modulators of RIPK1.
Acs Med.Chem.Lett., 16:811-818, 2025
Cited by
PubMed Abstract: Receptor-interacting protein kinase 1 (RIPK1) plays an essential role in necroptosis, a form of inflammatory, caspase-independent, programmed cell death. Allosteric inhibitors of RIPK1 have been shown to block necroptotic cell death and thus may offer potential therapeutic opportunities across a range of infectious, autoimmune, and neurodegenerative diseases. We report the structure-informed discovery of a novel series of bridged benzoazepine amides as part of our efforts to develop a CNS-penetrant small-molecule inhibitor of RIPK1 with a low projected oral human dose.
PubMed: 40365380
DOI: 10.1021/acsmedchemlett.5c00063
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (2.32 Å)
Structure validation

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