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9MN6

Structure of the human mitochondrial late-stage transcription initiation complex, IC8

Summary for 9MN6
Entry DOI10.2210/pdb9mn6/pdb
EMDB information48414
DescriptorNon-Template Strand DNA, RNA, Template Strand DNA, ... (7 entities in total)
Functional Keywordsmitochondrial rna polymerase, transcription initiation complex, transcription, polrmt, transcription-dna-rna complex
Biological sourceHomo sapiens (human)
More
Total number of polymer chains5
Total formula weight227415.87
Authors
Herbine, K.H.,Nayak, A.R.,Temiakov, D. (deposition date: 2024-12-20, release date: 2025-08-06, Last modification date: 2025-09-03)
Primary citationHerbine, K.,Nayak, A.R.,Zamudio-Ochoa, A.,Temiakov, D.
Structural basis for promoter recognition and transcription factor binding and release in human mitochondria.
Mol.Cell, 85:3123-3136.e7, 2025
Cited by
PubMed Abstract: Transcription in human mitochondria is driven by a core apparatus consisting of a Pol A family RNA polymerase (mtRNAP), the initiation factors TFAM and TFB2M, and the elongation factor TEFM. While earlier structures of initiation and elongation complexes provided valuable snapshots, they represent isolated stages of a highly dynamic and multistep process. Critical aspects of mitochondrial transcription-such as DNA recognition and melting, promoter escape, and the release of initiation factors-remain poorly understood. Here, we present a series of cryoelectron microscopy (cryo-EM) structures that capture the transcription complex as it transitions from the initial open promoter complex to the processive elongation complex through intermediate stages. Our data reveal new, previously unidentified determinants of promoter specificity: the sequential disengagement of mtRNAP from TFAM and the promoter, the release of TFB2M, and the recruitment of TEFM. Together, these findings provide a detailed molecular mechanism underlying transcription in human mitochondria.
PubMed: 40712587
DOI: 10.1016/j.molcel.2025.06.016
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.71 Å)
Structure validation

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