9EBW
Chimeric fluorescence biosensor formed from a lactate-binding protein and GFP, bound to lactate
Summary for 9EBW
| Entry DOI | 10.2210/pdb9ebw/pdb |
| Descriptor | Green fluorescent protein,Methyl-accepting chemotaxis transducer (TlpC), GLYCEROL, LACTIC ACID, ... (4 entities in total) |
| Functional Keywords | biosensor, binding protein, fluorescent protein, chimera |
| Biological source | Aequorea victoria More |
| Total number of polymer chains | 4 |
| Total formula weight | 234128.22 |
| Authors | Horwitz, S.M.,Ambarian, J.A.,Jones, R.,Waidmann, L.,Davis, K.M. (deposition date: 2024-11-13, release date: 2025-03-19) |
| Primary citation | Rosen, P.C.,Horwitz, S.M.,Brooks, D.J.,Kim, E.,Ambarian, J.A.,Waidmann, L.,Davis, K.M.,Yellen, G. State-dependent motion of a genetically encoded fluorescent biosensor. Proc.Natl.Acad.Sci.USA, 122:e2426324122-e2426324122, 2025 Cited by PubMed Abstract: Genetically encoded biosensors can measure biochemical properties such as small-molecule concentrations with single-cell resolution, even in vivo. Despite their utility, these sensors are "black boxes": Very little is known about the structures of their low- and high-fluorescence states or what features are required to transition between them. We used LiLac, a lactate biosensor with a quantitative fluorescence-lifetime readout, as a model system to address these questions. X-ray crystal structures and engineered high-affinity metal bridges demonstrate that LiLac exhibits a large interdomain twist motion that pulls the fluorescent protein away from a "sealed," high-lifetime state in the absence of lactate to a "cracked," low-lifetime state in its presence. Understanding the structures and dynamics of LiLac will help to think about and engineer other fluorescent biosensors. PubMed: 40048274DOI: 10.1073/pnas.2426324122 PDB entries with the same primary citation |
| Experimental method | X-RAY DIFFRACTION (2.78 Å) |
Structure validation
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