8QRW
ASCT2 protomer in lipid nanodiscs under low Na+ concentration in the intermediate outward-facing state (iOFS-up)
Summary for 8QRW
| Entry DOI | 10.2210/pdb8qrw/pdb |
| Related | 8QRO 8QRP 8QRQ 8QRR 8QRS 8QRU 8QRV 8QRW |
| EMDB information | 18621 18622 18623 18624 18625 18626 18627 18628 |
| Descriptor | Neutral amino acid transporter B(0), SODIUM ION (2 entities in total) |
| Functional Keywords | neutral amino acid exchanger amino acid transport system elevator transporter glutamine transport, transport protein |
| Biological source | Homo sapiens (human) |
| Total number of polymer chains | 1 |
| Total formula weight | 57490.78 |
| Authors | Borowska, A.,Rheinberger, J.,Paulino, C.,Slotboom, D.J. (deposition date: 2023-10-09, release date: 2024-08-14) |
| Primary citation | Borowska, A.M.,Chiariello, M.G.,Garaeva, A.A.,Rheinberger, J.,Marrink, S.J.,Paulino, C.,Slotboom, D.J. Structural basis of the obligatory exchange mode of human neutral amino acid transporter ASCT2. Nat Commun, 15:6570-6570, 2024 Cited by PubMed Abstract: ASCT2 is an obligate exchanger of neutral amino acids, contributing to cellular amino acid homeostasis. ASCT2 belongs to the same family (SLC1) as Excitatory Amino Acid Transporters (EAATs) that concentrate glutamate in the cytosol. The mechanism that makes ASCT2 an exchanger rather than a concentrator remains enigmatic. Here, we employ cryo-electron microscopy and molecular dynamics simulations to elucidate the structural basis of the exchange mechanism of ASCT2. We establish that ASCT2 binds three Na ions per transported substrate and visits a state that likely acts as checkpoint in preventing Na ion leakage, both features shared with EAATs. However, in contrast to EAATs, ASCT2 retains one Na ion even under Na-depleted conditions. We demonstrate that ASCT2 cannot undergo the structural transition in TM7 that is essential for the concentrative transport cycle of EAATs. This structural rigidity and the high-affinity Na binding site effectively confine ASCT2 to an exchange mode. PubMed: 39095408DOI: 10.1038/s41467-024-50888-8 PDB entries with the same primary citation |
| Experimental method | ELECTRON MICROSCOPY (3 Å) |
Structure validation
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