8BGG

Cryo-EM structure of SARS-CoV-2 spike (Omicron BA.1 variant) in complex with nanobody W25 (map 5, focus refinement on RBD, W25 and adjacent NTD)

Summary for 8BGG

• Entry DOI: 10.2210/pdb8bgg/pdb
• EMDB information: 15994 15997 16010 16028 16030
• Descriptor: Spike glycoprotein, Nanobody W25, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (5 entities in total)
• Functional Keywords: sars-cov-2, spike, omicron, ba.1, nanobody, w25, viral protein
• Biological source: Severe acute respiratory syndrome coronavirus 2; More
• Total number of polymer chains: 3
• Total formula weight: 288254.56

Authors

Modhiran, N.,Lauer, S.,Spahn, C.M.T.,Watterson, D.,Schwefel, D. (deposition date: 2022-10-27, release date: 2023-03-08, Last modification date: 2024-11-13)

• Primary citation: Schwefel, D.; Cryo-EM structure of SARS-CoV-2 spike (Omicron BA.1 variant) in complex with nanobody W25 (map 5, focus refinement on RBD, W25 and adjacent NTD); To Be Published,

Experimental method

ELECTRON MICROSCOPY (6.04 Å)