7YMR
Complex structure of lysoplasmalogen specific phopholipase D, F211L mutant with LPC
Summary for 7YMR
| Entry DOI | 10.2210/pdb7ymr/pdb |
| Descriptor | Lysoplasmalogenase, [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{5}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate (3 entities in total) |
| Functional Keywords | phospholipase d, lysoplasalogen, lysopaf, lpc, hydrolase |
| Biological source | Thermocrispum sp. RD004668 |
| Total number of polymer chains | 4 |
| Total formula weight | 139658.79 |
| Authors | Murayama, K.,Kato-Murayama, M.,Sugimori, D.,Shirouzu, M.,Hamana, H. (deposition date: 2022-07-29, release date: 2023-02-08, Last modification date: 2023-11-29) |
| Primary citation | Hamana, H.,Yasutake, Y.,Kato-Murayama, M.,Hosaka, T.,Shirouzu, M.,Sakasegawa, S.I.,Sugimori, D.,Murayama, K. Structural basis for the substrate specificity switching of lysoplasmalogen-specific phospholipase D from Thermocrispum sp. RD004668. Biosci.Biotechnol.Biochem., 87:74-81, 2022 Cited by PubMed: 36307380DOI: 10.1093/bbb/zbac169 PDB entries with the same primary citation |
| Experimental method | X-RAY DIFFRACTION (2.69 Å) |
Structure validation
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