7YMR
Complex structure of lysoplasmalogen specific phopholipase D, F211L mutant with LPC
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Lysoplasmalogenase | polymer | 314 | 34418.1 | 4 | UniProt (A0A0U4VTN7) Pfam (PF03009) | Thermocrispum sp. RD004668 | |
| 2 | E, F, G, H (A, B, C, D) | [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{5}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate | non-polymer | 496.6 | 4 | Chemie (KIP) | |||
| 3 | I, J, K, L (A, B, C, D) | water | water | 18.0 | 23 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 28 - 334 (UniProt: A0A0U4VTN7)
| PDB | External Database | Details |
|---|---|---|
| Met 27 | - | initiating methionine |
| Leu 211 | Phe 211 | engineered mutation |
| His 335 | - | expression tag |
| His 336 | - | expression tag |
| His 337 | - | expression tag |
| His 338 | - | expression tag |
| His 339 | - | expression tag |
| His 340 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 137672.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1986.6 | |
| All* | Total formula weight | 139658.8 |
