7YI7

Crystal structure of Human HPSE1 in complex with inhibitor

Summary for 7YI7

Entry DOI	10.2210/pdb7yi7/pdb
Descriptor	Heparanase 50 kDa subunit, Heparanase 8 kDa subunit, (5~{S},6~{R},7~{S},8~{S})-6,7,8-tris(oxidanyl)-2-[2-[4-(trifluoromethyl)phenyl]ethyl]-5,6,7,8-tetrahydroimidazo[1,2-a]pyridine-5-carboxylic acid, ... (4 entities in total)
Functional Keywords	endo-glucoronidase, heparanase-1, hep, hpa, hpa1, hpr1, hpse1, hse1, hydrolase, hydrolase-inhibitor complex, hydrolase/inhibitor
Biological source	Homo sapiens (human) More
Total number of polymer chains	2
Total formula weight	52123.91
Authors	Mima, M.,Fujimoto, N.,Imai, Y. (deposition date: 2022-07-15, release date: 2022-12-07, Last modification date: 2023-11-29)
Primary citation	Imai, Y.,Wakasugi, D.,Suzuki, R.,Kato, S.,Sugisaki, M.,Mima, M.,Miyagawa, H.,Endo, M.,Fujimoto, N.,Fukunaga, T.,Kato, S.,Kuroda, S.,Takahashi, T.,Kakinuma, H. Lead identification of novel tetrahydroimidazo[1,2-a]pyridine-5-carboxylic acid derivative as a potent heparanase-1 inhibitor. Bioorg.Med.Chem.Lett., 79:129050-129050, 2022 Cited by PubMed: 36368497 DOI: 10.1016/j.bmcl.2022.129050 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (2.8 Å)

Structure validation