7Y6S

Cryo-EM map of IPEC-J2 cell-derived PEDV PT52 S protein with three D0-up

This is a non-PDB format compatible entry.

Summary for 7Y6S

• Entry DOI: 10.2210/pdb7y6s/pdb
• EMDB information: 33646
• Descriptor: Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (8 entities in total)
• Functional Keywords: pedv, spike, glycoprotein, viral protein
• Biological source: Porcine epidemic diarrhea virus
• Total number of polymer chains: 3
• Total formula weight: 478333.03

Authors

Hsu, S.T.D.,Draczkowski, P.,Wang, Y.S. (deposition date: 2022-06-21, release date: 2022-08-03, Last modification date: 2022-09-14)

• Primary citation: Huang, C.Y.,Draczkowski, P.,Wang, Y.S.,Chang, C.Y.,Chien, Y.C.,Cheng, Y.H.,Wu, Y.M.,Wang, C.H.,Chang, Y.C.,Chang, Y.C.,Yang, T.J.,Tsai, Y.X.,Khoo, K.H.,Chang, H.W.,Hsu, S.D.; In situ structure and dynamics of an alphacoronavirus spike protein by cryo-ET and cryo-EM.; Nat Commun, 13:4877-4877, 2022; PubMed: 35986008; DOI: 10.1038/s41467-022-32588-3

Experimental method

ELECTRON MICROSCOPY (3.1 Å)