6K2D

The crystal structure of GBP1 with LRR domain of IpaH9.8

Summary for 6K2D

DescriptorGuanylate-binding protein 1, E3 ubiquitin-protein ligase ipaH9.8 (2 entities in total)
Functional Keywordscomplex, hydrolase-transferase complex, hydrolase/transferase
Biological sourceHomo sapiens (Human)
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Total number of polymer chains2
Total molecular weight81334.18
Authors
Ji, C.G.,Xiao, J.Y. (deposition date: 2019-05-14, release date: 2019-06-12, Last modification date: 2019-12-25)
Primary citation
Ji, C.,Du, S.,Li, P.,Zhu, Q.,Yang, X.,Long, C.,Yu, J.,Shao, F.,Xiao, J.Y.
Structural mechanism for guanylate-binding proteins (GBPs) targeting by the Shigella E3 ligase IpaH9.8.
Plos Pathog., 15:e1007876-e1007876, 2019
PubMed: 31216343 (PDB entries with the same primary citation)
DOI: 10.1371/journal.ppat.1007876
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.6 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2889 1.0% 6.4% 1.2%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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167518
PDB entries from 2020-08-12