6BPA

Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to monoclonal antibody 3E9

Summary for 6BPA

Related6BPB 6BPC 6BPD 6BPE
DescriptorReticulocyte binding protein 2, putative, Monoclonal antibody 3E9 Fab heavy chain, Monoclonal antibody 3E9 Fab light chain, ... (5 entities in total)
Functional Keywordsplasmodium vivax, invasion, malaria, antibody complex, cell invasion
Biological sourcePlasmodium vivax (strain Salvador I)
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Total number of polymer chains6
Total molecular weight179667.27
Authors
Gruszczyk, J.,Chan, L.J.,Tham, W.H. (deposition date: 2017-11-22, release date: 2018-06-20, Last modification date: 2018-07-18)
Primary citation
Gruszczyk, J.,Huang, R.K.,Chan, L.J.,Menant, S.,Hong, C.,Murphy, J.M.,Mok, Y.F.,Griffin, M.D.W.,Pearson, R.D.,Wong, W.,Cowman, A.F.,Yu, Z.,Tham, W.H.
Cryo-EM structure of an essential Plasmodium vivax invasion complex.
Nature, 559:135-139, 2018
PubMed: 29950717 (PDB entries with the same primary citation)
DOI: 10.1038/s41586-018-0249-1
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.53 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.22770.5%1.8%1.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6bpa
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Molmil generated image of 6bpa
rotated about x axis by 90°
Molmil generated image of 6bpa
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 6bpa
no rotation
Molmil generated image of 6bpa
rotated about x axis by 90°
Molmil generated image of 6bpa
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6bpa.pdb2.gz [249.95 KB])
Coordinate files for Biological unit (6bpa.pdb1.gz [250.26 KB])