5Y25

EGFR kinase domain mutant (T790M/L858R) with covalent ligand NS-062

Summary for 5Y25

DescriptorEpidermal growth factor receptor, (2R)-N-[4-[(3-chloranyl-4-fluoranyl-phenyl)amino]-7-(3-morpholin-4-ylpropoxy)quinazolin-6-yl]-1-(2-fluoranylethanoyl)pyrrolidine-2-carboxamide (2 entities in total)
Functional Keywordsinhibitor, complex, transferase, transferase-transferase inhibitor complex, transferase/transferase inhibitor
Biological sourceHomo sapiens (Human)
Total number of polymer chains1
Total molecular weight38741.19
Authors
Shiroishi, M.,Abe, Y.,Caaveiro, J.M.M.,Sakamoto, S.,Morimoto, S.,Fuchida, H.,Shindo, N.,Ojida, A. (deposition date: 2017-07-24, release date: 2018-07-25)
Primary citation
Shindo, N.,Fuchida, H.,Shiroishi, M.,Abe, Y.,Caaveiro, J.M.M.,Sakamoto, S.,Morimoto, S.,Ojida, A.
EGFR kinase domain mutant (T790M/L858R) with covalent ligand NS-062
To Be Published,
Experimental method
X-RAY DIFFRACTION (3.102 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.24962.1%1.2%1.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5y25
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Molmil generated image of 5y25
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Molmil generated image of 5y25
rotated about y axis by 90°