Crystal structure of the human BRPF1 bromodomain in complex with BZ038

Summary for 5O5F

DescriptorPeregrin, 1-ethyl-~{N}-[(~{R})-(3-fluorophenyl)-(1-methylimidazol-2-yl)methyl]-2,3-bis(oxidanylidene)-4~{H}-quinoxaline-6-carboxamide, NITRATE ION, ... (4 entities in total)
Functional Keywordsbromodomain and phd finger-containing protein 1(brpf1), monocytic leukemia zinc-finger (moz), inhibitor, transcription, dna binding protein
Biological sourceHomo sapiens (Human)
Total number of polymer chains1
Total molecular weight14249.13
Zhu, J.,Caflisch, A. (deposition date: 2017-06-01, release date: 2018-06-13, Last modification date: 2018-06-27)
Primary citation
Zhu, J.,Zhou, C.,Caflisch, A.
Structure-based discovery of selective BRPF1 bromodomain inhibitors.
Eur J Med Chem, 155:337-352, 2018
PubMed: 29902720 (PDB entries with the same primary citation)
DOI: 10.1016/j.ejmech.2018.05.037
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.1885005.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-09-16