5NDC

Structure of ba3-type cytochrome c oxidase from Thermus thermophilus by serial femtosecond crystallography

Summary for 5NDC

DescriptorCytochrome c oxidase subunit 1, Cytochrome c oxidase subunit 2, Cytochrome c oxidase polypeptide IIA, ... (9 entities in total)
Functional Keywordscytochrome c oxidase, oxidoreductase, sfx, respiratory chain enzyme
Biological sourceThermus thermophilus
Total number of polymer chains3
Total molecular weight92967.22
Authors
Andersson, R.,Safari, C.,Dods, R.,Nango, E.,Tanaka, R.,Nakane, T.,Tono, K.,Joti, Y.,Bath, P.,Dunevall, E.,Bosman, E.,Nureki, O.,Iwata, S.,Neutze, R.,Branden, G. (deposition date: 2017-03-08, release date: 2017-08-23, Last modification date: 2018-11-14)
Primary citation
Andersson, R.,Safari, C.,Dods, R.,Nango, E.,Tanaka, R.,Yamashita, A.,Nakane, T.,Tono, K.,Joti, Y.,Bath, P.,Dunevall, E.,Bosman, R.,Nureki, O.,Iwata, S.,Neutze, R.,Branden, G.
Serial femtosecond crystallography structure of cytochrome c oxidase at room temperature.
Sci Rep, 7:4518-4518, 2017
PubMed: 28674417 (PDB entries with the same primary citation)
DOI: 10.1038/s41598-017-04817-z
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.3 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2041 0.1% 2.6% 7.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

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Molmil generated image of 5ndc
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Molmil generated image of 5ndc
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