5FBC

S1 nuclease from Aspergillus oryzae in complex with 2'-deoxyadenosine-5'-thio-monophosphate (5'dAMP(S)).

Summary for 5FBC

Related5FB9 5FBA 5FBB 5FBD 5FBF 5FBG
DescriptorNuclease S1, ZINC ION, N-ACETYL-D-GLUCOSAMINE, ... (6 entities in total)
Functional Keywordsendonuclease, zinc dependent, complex, hydrolase
Biological sourceAspergillus oryzae RIB40 (Yellow koji mold)
Total number of polymer chains1
Total molecular weight30161.68
Authors
Koval, T.,Oestergaard, L.H.,Dohnalek, J. (deposition date: 2015-12-14, release date: 2016-12-28, Last modification date: 2017-01-11)
Primary citation
Koval, T.,stergaard, L.H.,Lehmbeck, J.,Nrgaard, A.,Lipovova, P.,Duskova, J.,Skalova, T.,Trundova, M.,Kolenko, P.,Fejfarova, K.,Stransky, J.,Svecova, L.,Hasek, J.,Dohnalek, J.
Structural and Catalytic Properties of S1 Nuclease from Aspergillus oryzae Responsible for Substrate Recognition, Cleavage, Non-Specificity, and Inhibition.
PLoS ONE, 11:e0168832-e0168832, 2016
PubMed: 28036383 (PDB entries with the same primary citation)
DOI: 10.1371/journal.pone.0168832
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.75 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.172500.5%0MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload