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5FBC

S1 nuclease from Aspergillus oryzae in complex with 2'-deoxyadenosine-5'-thio-monophosphate (5'dAMP(S)).

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Nuclease S1polymer26729083.71UniProt (P24021)
Pfam (PF02265)
Aspergillus oryzae RIB40 (Yellow koji mold)Deoxyribonuclease S1,Endonuclease S1,Single-stranded-nucleate endonuclease
2B, C, D
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
3E, F
(A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
4G
(A)
2-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATEnon-polymer347.31Chemie (AS)
5H
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
6I
(A)
waterwater18.0268Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight29083.7
Non-Polymers*Number of molecules7
Total formula weight1078.0
All*Total formula weight30161.7
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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