5BKE

Crystal structure of AAD-2 in complex with Mn(II) and N-oxalylglycine

Summary for 5BKE

Related5BKB 5BKD 5BK9 5BKC
DescriptorAlpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase, MANGANESE (II) ION, N-OXALYLGLYCINE, ... (5 entities in total)
Functional Keywordsdioxygenase, herbicide degradation, oxidoreductase
Biological sourceBradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110)
Total number of polymer chains7
Total molecular weight237506.73
Authors
Chekan, J.R.,Nair, S.K. (deposition date: 2019-06-02, release date: 2019-06-12, Last modification date: 2019-07-17)
Primary citation
Chekan, J.R.,Ongpipattanakul, C.,Wright, T.R.,Zhang, B.,Bollinger Jr., J.M.,Rajakovich, L.J.,Krebs, C.,Cicchillo, R.M.,Nair, S.K.
Molecular basis for enantioselective herbicide degradation imparted by aryloxyalkanoate dioxygenases in transgenic plants.
Proc.Natl.Acad.Sci.USA, 116:13299-13304, 2019
PubMed: 31209034 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.1900711116
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.15 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2341 0.5% 1.4% 2.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution