5BKB

Crystal structure of AAD-1 in complex with (R)-dichlorprop, Mn(II), and 2-oxoglutarate

Summary for 5BKB

Related5BKD 5BKC 5BK9 5BKE
Descriptor(R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase, MANGANESE (II) ION, 2-OXOGLUTARIC ACID, ... (7 entities in total)
Functional Keywordsdioxygenase, herbicide degradation, oxidoreductase
Biological sourceDelftia acidovorans (Pseudomonas acidovorans)
Total number of polymer chains2
Total molecular weight67536.6
Authors
Chekan, J.R.,Nair, S.K. (deposition date: 2019-06-02, release date: 2019-06-12, Last modification date: 2019-07-17)
Primary citation
Chekan, J.R.,Ongpipattanakul, C.,Wright, T.R.,Zhang, B.,Bollinger Jr., J.M.,Rajakovich, L.J.,Krebs, C.,Cicchillo, R.M.,Nair, S.K.
Molecular basis for enantioselective herbicide degradation imparted by aryloxyalkanoate dioxygenases in transgenic plants.
Proc.Natl.Acad.Sci.USA, 116:13299-13304, 2019
PubMed: 31209034 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.1900711116
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.582 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.19730 0.2% 2.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution