5FMD
Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with nystose
Summary for 5FMD
Entry DOI | 10.2210/pdb5fmd/pdb |
Related | 5ANN 5FIX 5FK7 5FK8 5FKB 5FKC 5FMB 5FMC 5FMD |
Related PRD ID | PRD_900044 |
Descriptor | BETA-FRUCTOFURANOSIDASE, beta-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (8 entities in total) |
Functional Keywords | hydrolase, carbohydrates, catalysis, catalytic domain, cloning, dimerization, quaternary, pichia pastoris, glycoside hydrolases, fungal proteins, kinetics, molecular conformation, substrate specificity, invertase, prebiotics, nystose |
Biological source | XANTHOPHYLLOMYCES DENDRORHOUS (PHAFFIA RHODOZYMA) |
Total number of polymer chains | 2 |
Total formula weight | 157948.06 |
Authors | Ramirez-Escudero, M.,Sanz-Aparicio, J. (deposition date: 2015-11-02, release date: 2016-02-10, Last modification date: 2024-01-10) |
Primary citation | Ramirez-Escudero, M.,Gimeno-Perez, M.,Gonzalez, B.,Linde, D.,Merdzo, Z.,Fernandez-Lobato, M.,Sanz-Aparicio, J. Structural Analysis of Beta-Fructofuranosidase from Xanthophyllomyces Dendrorhous Reveals Unique Features and the Crucial Role of N-Glycosylation in Oligomerization and Activity J.Biol.Chem., 291:6843-, 2016 Cited by PubMed: 26823463DOI: 10.1074/JBC.M115.708495 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (1.78 Å) |
Structure validation
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