4V7E

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

This is a large structure.

Summary for 4V7E

Related3J60 3J61 3J62
Integrates3J5Z 3J60 3J61 3J62
EMDB information1780
Descriptor18S ribosomal RNA, P-site tRNA, 5'-R(*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3', ... (86 entities in total)
Functional Keywordseukaryotic ribosome, homology modeling, de novo modeling, ribosomal rna, rrna, rna expansion segments, ribosome
Biological sourceTriticum aestivum (wheat)
Total number of polymer chains88
Total molecular weight3326877.74
Authors
Primary citation
Gogala, M.,Becker, T.,Beatrix, B.,Armache, J.P.,Barrio-Garcia, C.,Berninghausen, O.,Beckmann, R.
Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion.
Nature, 506:107-110, 2014
PubMed: 24499919 (PDB entries with the same primary citation)
DOI: 10.1038/nature12950
MImport into Mendeley
Experimental method
ELECTRON MICROSCOPY
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRNA backbone98.1%4.5%0.46MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures

More Asymmetric unit images

Molmil generated image of 4v7e
no rotation
Molmil generated image of 4v7e
rotated about x axis by 90°
Molmil generated image of 4v7e
rotated about y axis by 90°