Crystal structure of engineered Bradyrhizobium japonicum glycine:[carrier protein] ligase complexed with carrier protein from Agrobacterium tumefaciens and ATP

Summary for 4H2Y

Related3MF2 4H2S 4H2T 4H2U 4H2V 4H2W 4H2X
DescriptorAmino acid--[acyl-carrier-protein] ligase 1, Aminoacyl carrier protein, ZINC ION, ... (7 entities in total)
Functional Keywordsligase, atp binding, glycine binding, carrier protein, aminoacyl-trna synthetase, seryl-trna synthetase
Biological sourceBradyrhizobium japonicum
Total number of polymer chains4
Total molecular weight100563.66
Luic, M.,Weygand-Durasevic, I.,Ivic, N.,Mocibob, M. (deposition date: 2012-09-13, release date: 2013-03-06, Last modification date: 2017-08-23)
Primary citation
Mocibob, M.,Ivic, N.,Luic, M.,Weygand-Durasevic, I.
Adaptation of aminoacyl-tRNA synthetase catalytic core to carrier protein aminoacylation.
Structure, 21:614-626, 2013
PubMed: 23541895 (PDB entries with the same primary citation)
DOI: 10.1016/j.str.2013.02.017
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.211400.9%15.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 4h2y
no rotation
Molmil generated image of 4h2y
rotated about x axis by 90°
Molmil generated image of 4h2y
rotated about y axis by 90°